Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02295 ATGGCTTCCTCTGCTCCTTCTGCTTCTCTCATCTCCTCAAACCCTAACATTCTCTTCTCTCCCAAATTCCCTTCTTCTTCTTCCTTTTCTTCCCTCTCCTTCCCCAATTCCTCCAATTCCATTTTCAAACCTTTACGCACTTCTCTTAATCCATCATCTCCCGCTCTCAAACCCCTCGTTGCCAGGGCTTCGAATAATATGGTAATTCTACACTCTTCCTCCTTCGAGGTTGTGAGTTTTGTATTGGAATTTCTGTTCGTGTGTGGGAGAATCTTTTTCTGCAAACCATGGCAGCTTGAACTTCCATTAGTTGGGAACACAGCACCGGATTTTGAAGCAGAGGCTGTTTTTGATCAAGAGTTCATCAAGGTCAAACTATCTGAATATATTGGGAAAAAATATGTTATCCTCTTTTTCTACCCATTGGATTTCACATTCGTTTGCCCGACAGAAATCACCGCCTTCAGTGACCGGCATGCAGAGTTTGAGGAACTAAACACAGAGATTTTGGGTGTTTCAGTTGACAGTGTGTTTTCACACCTTGCATGGGTTCAAACTGATAGAAAGTCGGGTGGTCTTGGCGACTTGAAGTATCCTTTGATTTCTGATGTCACCAAATCCATCTCGAAATCTTATGGTGTTCTCATTCCCGATCAGGGGATTGCATTGAGAGGATTGTTCATTATTGACAAGGAAGGGGTTATTCAGCATTCTACCATTAATAACCTGGCCATTGGTAGAAGTGTTGATGAGACAAAGAGAACTCTCCAGGCCTTGCAGTATGTGCAGGAGAACCCAGATGAAGTTTGCCCAGCTGGGTGGAAGCCTGGTGAGAAGTCCATGAAACCAGACCCTAAACTTAGCAAAGAGTACTTCTCTGCTATTTAG 888 0.4358 MASSAPSASLISSNPNILFSPKFPSSSSFSSLSFPNSSNSIFKPLRTSLNPSSPALKPLVARASNNMVILHSSSFEVVSFVLEFLFVCGRIFFCKPWQLELPLVGNTAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFEELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02295 295 CDD PRX_Typ2cys 104 277 - -
Vimu6g02295 295 Pfam C-terminal domain of 1-Cys peroxiredoxin 258 293 IPR019479 GO:0051920
Vimu6g02295 295 Gene3D Glutaredoxin 97 295 - -
Vimu6g02295 295 PANTHER THIOREDOXIN PEROXIDASE 102 294 - -
Vimu6g02295 295 SUPERFAMILY Thioredoxin-like 102 293 IPR036249 -
Vimu6g02295 295 ProSiteProfiles Thioredoxin domain profile. 102 261 IPR013766 -
Vimu6g02295 295 Pfam AhpC/TSA family 104 237 IPR000866 GO:0016209|GO:0016491
Vimu6g02295 295 FunFam 2-Cys peroxiredoxin BAS1, chloroplastic 97 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02295 Vimu-Chr6 20061434 20063984 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02295 K03386 - qsu:111998654 392.889