Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02294 ATGGCTTCTCTGGCTCCTTCTGCTTCTCTCATCTCTTCAAATCCTAACATTTTCTTCTCTCCCAAATTCCCTTCTTCTTCATTTTCTTCTCTCTCCATCCCCTATTCTTCCAATTCCCTTTTCAAGCCTTTACGCACTTCTCTCAACCCTTCATCTCCCTCTCTCAAAACCTTCGTTGCCAGAGCTTCGAGTGAACTTCCATTGGTTGGGAACGTAGCACCGGACTTTGAAGCAGAGGCTGTTTTTGATCAGGAGTTTATCAAGGTCAAACTATCTGAATATATTGGGAAAAAATATGTTATCTTATTTTTCTACCCATTGGATTTCACATTCGTTTGTCCTACAGAAATCACTGCTTTCAGTGATCGGCATGCAGAGTTTGAGGAACTAAATACAGAGATTTTGGGTGTTTCAGTTGACAGTGTGTTTTCACACCTTGCATGGGTTCAAACTGATAGAAAGTCGGGTGGTCTTGGCGACTTGAATTATCCTTTGATTTCTGATATCACCAAATCCATCTCGAAATCTTTTGGTGTTCTCATTCCCGATCAGGGGATTGCATTGAGAGGATTGTTCATTATTGACAAGGAAGGAGTTATTCAGCATTCTACCATTAACAACCTGGCCATTGGTAGAAGTGTTGATGAGACAAAGAGAACTCTCCAGGCTTTGCAGTATGTGCAGGAGAACCCAGATGAAGTTTGCCCAGCTGGGTGGAAGCCTGGTGAGAAGTCCATGAAACCAGACCCTAAACTTAGCAAAGAGTACTTCTCTGCTATTTAG 783 0.4227 MASLAPSASLISSNPNIFFSPKFPSSSFSSLSIPYSSNSLFKPLRTSLNPSSPSLKTFVARASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFEELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDITKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02294 260 ProSiteProfiles Thioredoxin domain profile. 67 226 IPR013766 -
Vimu6g02294 260 Pfam C-terminal domain of 1-Cys peroxiredoxin 223 258 IPR019479 GO:0051920
Vimu6g02294 260 PANTHER THIOREDOXIN PEROXIDASE 64 259 - -
Vimu6g02294 260 FunFam 2-Cys peroxiredoxin BAS1, chloroplastic 61 260 - -
Vimu6g02294 260 Pfam AhpC/TSA family 69 202 IPR000866 GO:0016209|GO:0016491
Vimu6g02294 260 SUPERFAMILY Thioredoxin-like 67 258 IPR036249 -
Vimu6g02294 260 CDD PRX_Typ2cys 69 242 - -
Vimu6g02294 260 Gene3D Glutaredoxin 61 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02294 Vimu-Chr6 20053933 20056497 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02294 K03386 - cave:132192196 410.994