Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02287 ATGTCGGTGAAGGAGTGCCACCACCACAAGGGAAAGAAGCACAAGCTCTTCAAACGCATATTCTGGGGTATAGTCATCTTCGCGTTCATCGTGCTGCTCACGGTTCTCATAATCTGGGCGATTCTGAAGCCCACAAAGCCAACCTTCATCCTCCAAGACGTCACCGTGTTCGGGTTCAACGCCACCGTCCCGAACCTCCTCACCTCAAGCTTTCAGGTCACGCTTTCCTCGCGCAACCCCAACGACAAAATCGGCATCTACTACGACCGTCTCAGCACCTACGTCAGCTATAGGAACCAGCAAGTCACGTACCGAACCTCAATCCCTCCCTCCTACCAAGGTCACAAGGAAGAAGACGTGTGGTCCCCATTCGTCTACGGAAACAACGTCCCCGTCGCGCCCTACAACTTCCTCGGCCTCAGTCAGGATCAGTCTGACGGCAACGTCCTCGTCATCGTTAAAGTCGACGGTAAAGTCCGATGGAAGGTCGGCTCCTTTACCTCCGGCCACTACAACCTCTATGTAAGGTGCCCTGCTTTCATAACCTTTGGCCCTCGAAGCACCGGGATTGCTCTCGGCAATAACGCCGTCAAGTATCAACTGGTTCAGCGCTGCACCGTCGGGGTTTGA 630 0.5444 MSVKECHHHKGKKHKLFKRIFWGIVIFAFIVLLTVLIIWAILKPTKPTFILQDVTVFGFNATVPNLLTSSFQVTLSSRNPNDKIGIYYDRLSTYVSYRNQQVTYRTSIPPSYQGHKEEDVWSPFVYGNNVPVAPYNFLGLSQDQSDGNVLVIVKVDGKVRWKVGSFTSGHYNLYVRCPAFITFGPRSTGIALGNNAVKYQLVQRCTVGV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02287 209 PANTHER OS05G0367900 PROTEIN 18 196 IPR044839 GO:0098542
Vimu6g02287 209 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02287 Vimu-Chr6 20006345 20008332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02287 13 177 EF-hand Containing Proteins AT5G21130 21.965 2.81e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02287 - - gmx:100795832 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02287 6 20006345 20008332 Vimu6g02287 6 20006345 20008332 ECH