Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02258 ATGGCGACGCATCCGCAAACTCCGACCTCATCGAACGCCTTCTCCTTCCTGTCGAAGGGCTGGCGCGAGGTTCGAGACTCAGCGGACGCTGATATCCAACTCATGCGTGACCGAGCGAACTCGTTCAAAGACCTAGCCACGTCATTCGACCGCGAGCTCGAGAACTTCTTCAATTCCGCAACGCCGCCGTTCTCGGTTCCGGCCATGCGCTCTCCACCGCCGAGGGAGATCGAGTTCGTCAAGAGTCTACGCCCGAAGCTGTCGGAGATTCGACGCGCCTACTCCTCACCCGATTTCAGCAAGAGGGTTCTGGAGAAATGGAGCCCGAGGTCGCGGATTCGAATCGACCTTTCCGCGATAAAGAAGGCTATTGTGTCGGCGGAGGAAGATGGGATTGTGGATTTCGAGAAGAGGGGAAGGAGGTTGAGTTTCTGGGAGGAGTGGAAAAACGAAGGCGAGGGTGAATCGAAGGACTGGGAGCCGATTCGTGCATTGAAGATCAGGCTCAAGGAGTTTGAGAAGCGCGGTTCTTCTTTCGAGGCTTTCAAGAACAGTGAATTCTTGGAGAAAGTCAAGTCTGGCTTGAAATCAATGTGCAAGGAACCTGAGGAGTCAAAGGAAGTGCCACCATTGGATGTACCCGAACTTCTTGCCTACTTTGTAAAACAGTCTGGGCCATTTTTGGACCATCTTGGAGTGAAAAGAGACGTATGTGACAAGATAGTTGAAAGTTTGTATAGCAAACGCAGAAACCATCTTCTATTGCAATCCCTGTCTGGGGAAGAGTCTTCTATTGTTGGGAACGGAAACATAAATGATGAATTGGATTTACGAATAGCAAGCGTCCTTCAGAGCACAGGACACCGTCACGAAGGTGGATTCTGGACAGACCATGCTAAGCATGATCCGACTGATAGTGAAAGACATGTTGCAATAGTCACAACTGCTAGTCTTCCTTGGATGACAGGAACAGCTGTAAACCCCCTATTTCGAGCTGCATATTTATCACAATCTGCAAAGCAGAAAGTCACTCTGTTGGTTCCATGGCTTTCTAAATCAGATCAAGAGCTTGTTTATCCCAGCAGTCTTACTTTTACATCACCAGAAGAACAGGAAGTTTACATACGTAGCTGGCTTGAAGAAAGGATTGGTTTTAAGGCAGACTTCAAAATTTCTTTTTATCCTGGGAAGTTTTCAAAGGAAAGACGGAGTATAATACCTGCTGGAGATACTTCTCAATTTATACCATCCAAGGATGCTGACATTGCTATCCTGGAAGAGCCGGAACATTTAAATTGGTACCATCATGGCAAACGTTGGACTGACAAATTCAACCATGTTGTTGGTATTGTTCACACAAATTACTTGGAATATATCAAGCGGGAGAAAAATGGAGCACTCCAGGCATTCTTTGTGAAACACATAAACAACTGGGTTACAAGAGCATACTGCCACAAGGTTCTTCGTCTTTCAGCTGCTACTCAGAATTTACCCAAGTCTGTAATTTGCAATGTTCATGGTGTGAATCCAAAGTTCTTGGAAATTGGAGAAAAAATTGCTGCAGAGAGGGAGCTTGGGCAGAAATCCTTTACAAAAGGGGCGTATTTCTTGGGAAAGATGGTGTGGGCAAAGGGATATAAGGAGTTGATAGATTTATTAGCAAAGCATAAGGCTGACCTTGATGGCTTCAAGTTGGATGTGTTTGGAAATGGAGAGGATGCTAATGAAGTTCAGAGTGCAGCTAGGAAGTTAGATTTGAATCTCAGCTTTCAAAAAGGAAGAGATCATGCAGACGATTCTCTTCACGGGTACAAAGTTTTTATAAATCCTAGCATTAGCGATGTGCTGTGCACTGCTACAGCTGAGGCACTTGCCATGGGAAAATTTGTAGTTTGTGCAGATCATCCGTCAAACGAGTTCTTCAGGTCATTTCCCAACTGTTTGACGTACAGGACGTCCGAAGACTTTGTGGCAAAAGTAAAAGAAGCATTAGAAAACGAGCCGTATCCTCTAACACCTGAGCAAAGATATCAACTTTCTTGGGAGGCCGCTACTCAAAGATTTATGGAATATTCTGAGCTTGACAGCATCCTGAATAAGGAAAATAATGGTGAAAAATCAAGCCTAGATAAAGGAAAGCTCGTTCCCAAGTCAGTTTCAATGCCTAATCTGACGGAACTAGTAGATGGAGGCTTAGCATTTGCTCACTATTGTCTCACTGGGAATGAATTCCTGAGATTATGCACAGGAGCAATACCTGGGACACGTGACTACGATAAACAGCACTGTAAAGACCTTCATCTTTTGCCGCCGCAGGTAGAAAATCCCATCTATGGCTGGTGA 2343 0.4533 MATHPQTPTSSNAFSFLSKGWREVRDSADADIQLMRDRANSFKDLATSFDRELENFFNSATPPFSVPAMRSPPPREIEFVKSLRPKLSEIRRAYSSPDFSKRVLEKWSPRSRIRIDLSAIKKAIVSAEEDGIVDFEKRGRRLSFWEEWKNEGEGESKDWEPIRALKIRLKEFEKRGSSFEAFKNSEFLEKVKSGLKSMCKEPEESKEVPPLDVPELLAYFVKQSGPFLDHLGVKRDVCDKIVESLYSKRRNHLLLQSLSGEESSIVGNGNINDELDLRIASVLQSTGHRHEGGFWTDHAKHDPTDSERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKQKVTLLVPWLSKSDQELVYPSSLTFTSPEEQEVYIRSWLEERIGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCHKVLRLSAATQNLPKSVICNVHGVNPKFLEIGEKIAAERELGQKSFTKGAYFLGKMVWAKGYKELIDLLAKHKADLDGFKLDVFGNGEDANEVQSAARKLDLNLSFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYRTSEDFVAKVKEALENEPYPLTPEQRYQLSWEAATQRFMEYSELDSILNKENNGEKSSLDKGKLVPKSVSMPNLTELVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPPQVENPIYGW 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02258 780 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic 508 666 - -
Vimu6g02258 780 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic-like 397 507 - -
Vimu6g02258 780 Gene3D Glycogen Phosphorylase B; 532 686 - -
Vimu6g02258 780 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 8 778 IPR044525 GO:0046481
Vimu6g02258 780 CDD Glycosyltransferase_GTB-type 439 641 - -
Vimu6g02258 780 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 310 690 - -
Vimu6g02258 780 Pfam Glycosyl transferases group 1 535 669 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02258 Vimu-Chr6 19754472 19759806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02258 12 602 Glycosyltransferase AT3G11670 68.750 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02258 K09480 - gmx:100796354 1493.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02258 6 19754472 19759806 Vimu6g02258 6 19754472 19759806 ECH