Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02234 ATGGAATCTGATGCACTGGCATGGGGAGACAAACTCGTACTGAGGGGATTGTCATTCCATGGCTTTCATGGAGCAAAGCCAGAAGAAAGGAAACTAGGCCAGAAGTTCGTGGTAGATATAGATGCTTGGATGGATCTTGCAGCTGCTGGAAAAACTGATCACTTATCAGATACAGTCAGTTACACAGCAATATATGATATAGCCAAGGAAATTCTTGAAGGGTCACCTCACAACCTTCTGGAATCAGTGGCCCAAAAAATTGCAATAACTACTCTGACAAATCATAAAGAAATTTTAGCCGTTCGAGTGAAGGTTGGAAAGCCTCATGTGGCAGTTCGAGGTCCAGTTGAGTACTTAGGCGTTGAGATTTATAGACGGAGGAGCGATTTGTCAGGCTAA 399 0.4361 MESDALAWGDKLVLRGLSFHGFHGAKPEERKLGQKFVVDIDAWMDLAAAGKTDHLSDTVSYTAIYDIAKEILEGSPHNLLESVAQKIAITTLTNHKEILAVRVKVGKPHVAVRGPVEYLGVEIYRRRSDLSG 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02234 132 SMART FolB_2 12 125 IPR006157 GO:0004150|GO:0006760
Vimu6g02234 132 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 10 127 - -
Vimu6g02234 132 NCBIfam dihydroneopterin aldolase 10 124 IPR006156 GO:0004150|GO:0006760
Vimu6g02234 132 FunFam 7,8-dihydroneopterin aldolase 9 128 - -
Vimu6g02234 132 Gene3D - 9 130 IPR043133 -
Vimu6g02234 132 Pfam Dihydroneopterin aldolase 13 123 IPR006157 GO:0004150|GO:0006760
Vimu6g02234 132 CDD DHNA_DHNTPE 10 126 IPR006157 GO:0004150|GO:0006760
Vimu6g02234 132 PANTHER DIHYDRONEOPTERIN ALDOLASE 1-RELATED 8 128 IPR006156 GO:0004150|GO:0006760
Vimu6g02234 132 NCBIfam FolB domain 10 127 IPR006157 GO:0004150|GO:0006760
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02234 Vimu-Chr6 19544845 19545385 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02234 K01633 - var:108334837 241.891