Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02216 ATGCGTGATAATGTCATCAGTCTCAAGGTGGTTCTTGCCAATGGAGACATTGTAAAGACTGCATCACGTGCCAGGAAGAGTGCTGCGGGTGAAGGAACACTTGGTCTTATAACAGAAGTAACCCTGCGGCTTCAGAAAATTCCTCAGCATTCAGTGGTTCCTCTGAAAATTGCTGTACCTTTTCTACTGCCTTGTGTTTCTTCCTTCTGCAATTTTCATACATGGCCAGTCCAAGCTCTCGGTAGAAATCATATGGGTTATTTGACTAATCAAAATGCACAGGTTGCAATGTGCAATTTTCCTTCTGTGAAGGATGCAGCAGATGTTGCTATTGCCACAATGAGGTCTGGTGTACAGGTGTCAAGGGTAGAGCTATTGGATGAAGTTCAAGTGAAAGCTATCAACATTGCTAATGGGAAAAATTTGCCTGAAAGTCCAACCTTAATGTTTGAATTTATAGGAACAGAGGCATATGCACGCGAGCAAACACAAATTGTTCGGAAAATTGTTTCTGAGCACAATGGCTCAGATTTTGTATTTGCAGAAGAACCGGAAGCAAAAAAAGAACTTTGGAAGGTAAGGAAAGAGGCACTCTGGGCTTGCTTTGCAATGGAACCTAATCTGGAGGCAATGATTTCAGATGTATGTGTTCCTTTATCTCACCTTGGTGATTTAATTTCAAGGTCTAAAAAGGAGCTGGATGCTTCACCACTAGTTTGCACAGTAATTGCTCATGCCGGAGATGGTAATTTCCACACGGTTATTCTATTTGATCCTAGCCAAGAAGAACATCGACGGGAGGCAGAGAGACTCAACCAATTTATGGTTCATGCTGCCTTGTCATTGGAAGGTATTATCATTAACTTGTTGACTCTTTCTGTTGCCTGTTAG 891 0.4198 MRDNVISLKVVLANGDIVKTASRARKSAAGEGTLGLITEVTLRLQKIPQHSVVPLKIAVPFLLPCVSSFCNFHTWPVQALGRNHMGYLTNQNAQVAMCNFPSVKDAADVAIATMRSGVQVSRVELLDEVQVKAINIANGKNLPESPTLMFEFIGTEAYAREQTQIVRKIVSEHNGSDFVFAEEPEAKKELWKVRKEALWACFAMEPNLEAMISDVCVPLSHLGDLISRSKKELDASPLVCTVIAHAGDGNFHTVILFDPSQEEHRREAERLNQFMVHAALSLEGIIINLLTLSVAC 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02216 296 PANTHER D-LACTATE DEHYDROGENASE 1 53 - -
Vimu6g02216 296 Gene3D - 209 287 - -
Vimu6g02216 296 Gene3D - 1 59 IPR016169 -
Vimu6g02216 296 SUPERFAMILY FAD-binding/transporter-associated domain-like 1 48 IPR036318 GO:0050660
Vimu6g02216 296 Pfam FAD linked oxidases, C-terminal domain 90 286 IPR004113 GO:0003824|GO:0050660
Vimu6g02216 296 ProSiteProfiles PCMH-type FAD-binding domain profile. 1 47 IPR016166 GO:0071949
Vimu6g02216 296 FunFam D-lactate dehydrogenase mitochondrial 209 287 - -
Vimu6g02216 296 SUPERFAMILY FAD-linked oxidases, C-terminal domain 94 286 IPR016164 GO:0003824|GO:0050660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02216 K00102 - gmx:100803612 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02216 6 19429264 19438001 Vimu6g02216 6 19429264 19438001 ECH