Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02213 ATGGAGCGGGAGAAAAAAAACATGGCATCTCCTCTGCTGGAGCCTGTGCCTTCAAAGAGGGCTTCCAAGCTTCAAACATTGGGAAACATCATAGTCACCGTTGTCGGAACTGGAGTTCTTGGATTACCCTTTGCTTTTCGGATCGCTGGGTGGGTCGCTGGGTCGCTTGGGGTTGCTGTTGTCGGCTTATCCACTTACTATTGCATGCTTCTTCTTGTGGGTTTTGTTTTTATTTCTTGGTCACAGGTTAATTGCAGAGACAAATTGGCGTCTGAAGAGCCACTGGGGGAATCAAACACATATGGAGACTTGGGTTATAGGTCTTTTGGAACCCTAGGTCGGTTTGTGACAGAAATTATAATTGTGGTAGCACAATGTGCTGGATCTATTGCTTATTTTGTGTTTATTGGACAAAACCTTCATTCTGTATTTGAAGGCCAAAACATATCAATGGCCTCCTTTATATTTATGTTGGTACCTGTTGAGATTGGATTGGCTTGGATAGGGAGCTTATCTGCTTTGGCACCTTTCAGCATTTTTGCTGATGTTTGCAATGTCTTGGCTATGGGAATTGTGGTGAAGGAGGACGTACAACGGGCCTTCGGGGAGGGGTTTTCATTTGGAGAAAGGACAGCAATCACATCCAACATTGGGGGATTGCCATTTGCAGCAGGCATGGCAGTGTTTTGTTTTGAGGGGTTTGGAATGACACTGGCTCTAGAGAATTCTATGCAAGATAGACGTAAGTTCCCAATATTGCTAGCTCAGACTTTTGGTGGGATAACTCTTGTGTACATTCTTTTTGGTTTTTGTGGTTACATGGCTTTTGGTGAAGAAACCAGAGACATTGTGACCCTCAATCTCCCAAGGAATTGGTCATCTCTTTCAGTGCAGGTAGGATTATGTGTTGGGCTTGCATTCACACTTCCAATCATGTTACACCCAATCAATGAGATTGTGGAAGGGAAACTCAAAATCATTTTCAGAAACAACAATGATTCAACGGGACCAGGAAATATCTGCATATGCATCAGCCGAGCGATTGTGGTGGTTGGACTGGCAGTGATAGCTTCATTCGTGCCAGAATTTGGTGTATTTGCCTCATTTGTGGGGAGTACCTTATGTGCAATGCTCTCATTTGTTTTGCCAGCCACATTTCACCTAAAGCTACTTGGCTCTTCTCTACCCTTCTGGCGTAAAGCCTTAGATTTTATTGTATTATTTTCTGGATTGTTTTTTGCCATTTATGGAACTTACAACACAATAGTTGGAGTTTGA 1278 0.4319 MEREKKNMASPLLEPVPSKRASKLQTLGNIIVTVVGTGVLGLPFAFRIAGWVAGSLGVAVVGLSTYYCMLLLVGFVFISWSQVNCRDKLASEEPLGESNTYGDLGYRSFGTLGRFVTEIIIVVAQCAGSIAYFVFIGQNLHSVFEGQNISMASFIFMLVPVEIGLAWIGSLSALAPFSIFADVCNVLAMGIVVKEDVQRAFGEGFSFGERTAITSNIGGLPFAAGMAVFCFEGFGMTLALENSMQDRRKFPILLAQTFGGITLVYILFGFCGYMAFGEETRDIVTLNLPRNWSSLSVQVGLCVGLAFTLPIMLHPINEIVEGKLKIIFRNNNDSTGPGNICICISRAIVVVGLAVIASFVPEFGVFASFVGSTLCAMLSFVLPATFHLKLLGSSLPFWRKALDFIVLFSGLFFAIYGTYNTIVGV 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02213 425 PANTHER AMINO ACID TRANSPORTER 17 419 - -
Vimu6g02213 425 Pfam Transmembrane amino acid transporter protein 20 422 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02213 Vimu-Chr6 19407204 19409442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02213 11 425 Organic Solute Cotransporters AT3G11900 61.593 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02213 K14209 - gmx:100305659 707.212