Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02199 ATGGAGGGTGAGGGTGCGGCAGTGTGGCAAGGTGCGGTTTTGGGTGGAATACTTTTCTGGATTGTTTCTGCTTCATACCTCGACGTTACTCGCAAGCTTAGATCTTTCTTTCAACCTTGGGTTTCTCATCATGTTGAAACTCAAACCTCTGTTGTCCTTAAGATCCAGAGTTACGGGTTTGGGTTCCTGGATGCACTTTTCTCAGGGTTGTCTTGCGTTGTTTCTGTGCCCTTCTACACTGGTTTTCTCCCTCTGCTGTTCTGGAGTGGACATGGCAAACTGGCGAGGCAGATGACGTTGTTGATGGCGTTTTGTGATTATCTTGGTAACTGCATAAAGGATGTGGTTTCAGCTCCAAGACCTGCTTCTCCACCTGTCAAGAGAGTAACTGCCACAAAAGATGAAGAAGAGAACGCGTTAGAATATGGATTGCCTTCTTCTCACACCCTCAACACAGTTTGCTTATCTGGGTTCCTAGTCTATGGCAAGGTGGCTGTTGATCTTACTTTTCTTCCTATGTATTTTCCGGTTCAAGGAAAGAAACTACCTTCTGCACTATGTTCTGACTCATACTCAAATTCAAGGTGCCTATATTACTTATCTTGGAATTTCTCTTGCCTTCATGCTGGAAGAATTTATCTTGGCATGCATAGTGTGGTTGATGTTCTTGCTGGGCTTCTTGTTGGATTGGTGATCCTTGCTTTCTGGCTTACGGTTCATGAACACATAGACAGTTTTGTGATCTCAGGACAAAATGTTACATCCTTTTGGGCTGTCTTGAGCTTCCTCTTGCTTTTTGCTTATCCTACACCTGAACTTCCAACTCCAAGCTTCGAGTTTCACACTGCATTCAACGGTGTTGCATTGGGAATTGTGGCTGGAGTACAGCAAACATACCATCAATTTCACCATGGAGACGTTCCTCGGTTGTTCTCTTCAGAACTGAGTGTGCCTGTATTTGCGGGAAGGATGCTGGTGGGCATACCAACAATTCTAACTGTGAAATTCTGCAGTAAGGCTCTCGCAAAATGGACCATTCCAATGGTAGCAAACACCTTGGGCATCCCAATAAAATCAACCAGTTACATACCCACATTGAATGGATCTGCTGCAGTGAAGAAGACTGATAAGCTCAAACAAGGTTACTTGCAAAAGCTTCTTTCCCGGTATAAGGCATTCGATGTTGATACCGGAATTAGATTTCTTCAGTATGCAGGTCTTGCCTGGTCTGTAGTTGATCTAGTGCCGTCGCTTTTTTCATACATGAGTTTGTGA 1275 0.4424 MEGEGAAVWQGAVLGGILFWIVSASYLDVTRKLRSFFQPWVSHHVETQTSVVLKIQSYGFGFLDALFSGLSCVVSVPFYTGFLPLLFWSGHGKLARQMTLLMAFCDYLGNCIKDVVSAPRPASPPVKRVTATKDEEENALEYGLPSSHTLNTVCLSGFLVYGKVAVDLTFLPMYFPVQGKKLPSALCSDSYSNSRCLYYLSWNFSCLHAGRIYLGMHSVVDVLAGLLVGLVILAFWLTVHEHIDSFVISGQNVTSFWAVLSFLLLFAYPTPELPTPSFEFHTAFNGVALGIVAGVQQTYHQFHHGDVPRLFSSELSVPVFAGRMLVGIPTILTVKFCSKALAKWTIPMVANTLGIPIKSTSYIPTLNGSAAVKKTDKLKQGYLQKLLSRYKAFDVDTGIRFLQYAGLAWSVVDLVPSLFSYMSL 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02199 424 Pfam PAP2 superfamily 98 240 IPR000326 -
Vimu6g02199 424 CDD PAP2_SPPase1 62 237 - -
Vimu6g02199 424 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 20 356 - -
Vimu6g02199 424 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 40 245 IPR036938 -
Vimu6g02199 424 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 38 251 - -
Vimu6g02199 424 SMART acid_phosph_2 95 237 IPR000326 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02199 - - gmx:100807865 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02199 6 19308117 19311898 Vimu6g02199 6 19308117 19311898 ECH