Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02182 ATGCAGAAGGAAGAGACTGAGGGAGTCATAGTGGTCGGAGCAGGCCCCTCGGGCCTTTCCGCCGCCGCATGTTTAAGGAAGCACTCAATTCCGTTCATAATCATTGAGAGAGAAGACTGTTTCGCTTCTCTATGGAAGAAATACTCTTACGACCGTCTCCACCTCCATCTCAGAAAGCAGTTCTGCCAGCTTCCCCACAAGCCATTTCCACCCGCTTTCCCTTCCTACGTTCCCAAGAACCAGTTCCTAGAGTACCTCGACGACTACGTCTCCCACTTCGCCATCGCGCCGCTCTATCGGAGGACGGTGGAGCTGGCCCAGTACGACGACGCCCGCCGCTGCTGGAGGGTGGAGGCCCGGAATGGGGAATCCGGCGAGGTGGAGAAGTACTGCGGGAGATTCCTGGTGGTGGCTACTGGGGAAACTAGCGACCCCTTTGTGCCGGCGGTGGAAGGGTTGAGTAGTTTCCCTGGAAAGGTGATTCATTCCACTAGGTTCAAGTCAGGGAAGGAGTTCAAAGACGAGCATGTTCTTGTTGTTGGGTCTGGGAATTCCGGCATGGAAATCGCTTTGGACCTTGTCAACCATGGTGCCAAAACCTCCATTCTTGTTCGAAGCCCGTATTTGTCGTTGAGCAGTGTGGACTCGTTGATGGTGATTCTGAGCACCATAGTTTACGGTGATGTGACTAAATATGGGGTTAAAAGACCCACTGAAGGACCCTTTTCCATGAAGAACAATCATGGAAAGTATCCAGTTATTGACGTTGGAACCTACAAGAAGATAAAATCTCATGAATTAAAGGTTTTGGCAGCAGAAATAGAAAGCGTAAGAGGCAAGGATGTCCTATTCAAGAATGGAGAGTTACACCCATTTGACTCCATTGTTTTCTGCACAGGCTTCAAGAGATCAACCAACAAGTGGCTCAAGGATGATGAACTTCTGAATGATGAGGGTCTTCCAAAGCCAAAATACCCCAGCCATTGGAAGGGAAATAATGGTTTGTACTGTGTTGGCCTATCAAGAAGAGGTTTCTATGGAGCTGCTGCAGATGCTGAAAATATAGCGAATGATATAAGCTTCTTCATGCAACAACCCTGA 1101 0.4923 MQKEETEGVIVVGAGPSGLSAAACLRKHSIPFIIIEREDCFASLWKKYSYDRLHLHLRKQFCQLPHKPFPPAFPSYVPKNQFLEYLDDYVSHFAIAPLYRRTVELAQYDDARRCWRVEARNGESGEVEKYCGRFLVVATGETSDPFVPAVEGLSSFPGKVIHSTRFKSGKEFKDEHVLVVGSGNSGMEIALDLVNHGAKTSILVRSPYLSLSSVDSLMVILSTIVYGDVTKYGVKRPTEGPFSMKNNHGKYPVIDVGTYKKIKSHELKVLAAEIESVRGKDVLFKNGELHPFDSIVFCTGFKRSTNKWLKDDELLNDEGLPKPKYPSHWKGNNGLYCVGLSRRGFYGAAADAENIANDISFFMQQP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02182 366 PRINTS FAD-dependent pyridine nucleotide reductase signature 9 28 - -
Vimu6g02182 366 PRINTS FAD-dependent pyridine nucleotide reductase signature 176 194 - -
Vimu6g02182 366 Pfam Pyridine nucleotide-disulphide oxidoreductase 10 325 - -
Vimu6g02182 366 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Vimu6g02182 366 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 8 361 - -
Vimu6g02182 366 PIRSF FMO 5 212 IPR000960 GO:0050660|GO:0050661
Vimu6g02182 366 PIRSF FMO 240 344 IPR000960 GO:0050660|GO:0050661
Vimu6g02182 366 SUPERFAMILY FAD/NAD(P)-binding domain 9 211 IPR036188 -
Vimu6g02182 366 PRINTS Pyridine nucleotide disulphide reductase class-II signature 8 30 - -
Vimu6g02182 366 PRINTS Pyridine nucleotide disulphide reductase class-II signature 172 196 - -
Vimu6g02182 366 Gene3D - 1 365 IPR036188 -
Vimu6g02182 366 SUPERFAMILY FAD/NAD(P)-binding domain 176 361 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02182 Vimu-Chr6 19184721 19187795 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02182 K11816 - gmx:102668138 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02182 6 19184721 19187795 Vimu6g02182 6 19184721 19187795 ECH