Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02181 ATGCAGAGAGAGAAGGTGATAATAGTCGGAGCCGGAACTTCCGGCATGGCCGCAGCATCATACTTAACGAAGCAATCAATACCTTACATCATTCTCGAAAGAGAAGATTGTTCGGCTTCCATGTGGAAAAAGTACACGTACGATCGTCTCCATCTCCATTTGGTCAAGCGAGTGTGCGAGTTACCGTTCTTTCCGTTTCCCAACTCTTACCCTAACTACGTGCCTCGGAAGCTCTTCATCCAATACTTGGAAACCTACGAGAAGCATTTCGACATGAAGATTTTGTATCACCGCTGCGTGGTGCTGGCGGAGTATGACGAAAAGGAACAGCTCTGGAGAGTGAAGGCTCAAAACAGAAGTACCGGTGAAGTGGAAGAGTACGGTGGAAGGTTTTTGGTGGTGGCAAGTGGCGAAGATAAGCCTCACGTGCCTAGGGTTGAAGGGTTGGAGAGTTTCAGAGGAAGAGTGATTCATTCAACTTCGTACAGAAACGGGATGGAGTACAGAGATGAACATGTTCTGGTTGTTGGATCTGGGAATTCTGGCATGGAGATTGCGCTTGATTTGGCCAATTTTGGTGCTAAGCCTTCCATCGTTGCTCGCACTCCGGTTCACTTTCTTTCTAGGAATATGATGAATTACGGGTCACTTTTGTTATGGTATTTGTCACGAGAAACAGTGGAGAAACTGTTGGGGATAGTTAGCAGGATTGTGTATGGTGATCTGAGTAAGTATGGGCTGCCGTTTCCCAGTGAAGGTCCTTTCACCATGAAGCAAAAGTATGGTAAGTTCCCGGTCATTGATTTGGGAACAATCAAGAAAATCAAATCTGGAGAGATACAGGTGGTGCCCACAGAAATAGAGAGTATAAGAGGCAACGAAGTGTTGTTCCGAGACGACAAATCGTTCCCCTTTGATTCAATTATTTTCTGCACAGGCTTCAAGAGAACCACTCAAAATTGGCTCAAGGGAGGTGAAGATCTTCTGAACGAGGATGGTTTTCCTTGTTCGAAAAATCAATGGAAGGGTAAGAACGGTTTGTACTGCGTTGGAATGGGAAGAACAGGATTCTATGGAGCCAATTCTCAGGCTCAAAACATAGCACATGATATTGTCTCGTTAGTTCCATAA 1131 0.4527 MQREKVIIVGAGTSGMAAASYLTKQSIPYIILEREDCSASMWKKYTYDRLHLHLVKRVCELPFFPFPNSYPNYVPRKLFIQYLETYEKHFDMKILYHRCVVLAEYDEKEQLWRVKAQNRSTGEVEEYGGRFLVVASGEDKPHVPRVEGLESFRGRVIHSTSYRNGMEYRDEHVLVVGSGNSGMEIALDLANFGAKPSIVARTPVHFLSRNMMNYGSLLLWYLSRETVEKLLGIVSRIVYGDLSKYGLPFPSEGPFTMKQKYGKFPVIDLGTIKKIKSGEIQVVPTEIESIRGNEVLFRDDKSFPFDSIIFCTGFKRTTQNWLKGGEDLLNEDGFPCSKNQWKGKNGLYCVGMGRTGFYGANSQAQNIAHDIVSLVP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02181 376 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 5 373 - -
Vimu6g02181 376 SUPERFAMILY FAD/NAD(P)-binding domain 170 371 IPR036188 -
Vimu6g02181 376 PRINTS FAD-dependent pyridine nucleotide reductase signature 129 147 - -
Vimu6g02181 376 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Vimu6g02181 376 PRINTS FAD-dependent pyridine nucleotide reductase signature 172 190 - -
Vimu6g02181 376 Pfam Pyridine nucleotide-disulphide oxidoreductase 7 203 - -
Vimu6g02181 376 SUPERFAMILY FAD/NAD(P)-binding domain 2 239 IPR036188 -
Vimu6g02181 376 PIRSF FMO 2 325 IPR000960 GO:0050660|GO:0050661
Vimu6g02181 376 Gene3D - 1 375 IPR036188 -
Vimu6g02181 376 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Vimu6g02181 376 PRINTS Pyridine nucleotide disulphide reductase class-II signature 168 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02181 Vimu-Chr6 19172078 19173926 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02181 K11816 - gmx:100777958 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02181 6 19172078 19173926 Vimu6g02181 6 19172078 19173926 ECH