Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02169 ATGTCCAAGAAAGAGATATCGCAGCTGCAGAAAAAGGAAGTTGAGATGAAAAAGGCTGCAGCTAGAGGTAGCAAGGCTGAGCAGAAAGCTAAGAAGAAGCAAGTGGAGGAAGAGGTTTCTCAACTTTCTACAAAGCTGAAGGAGAATCATGCCAAGGAATTGGCTGCATTAGGCTATAGCAGCGGTAATGGGAATGAAAAGAGCAATTTGGACACTTTGGTTAAGGCCATTGCTGGAGTATCTGTTGCTAGTCAACCTGAACATACAAAGGTCAGCAAGGCCAAACAGAGGCGTGACAAAAGAGCTCAACAAGAAGCAGAAAGGGAACAGAGAATCCAAGCAGAGCAGACTGACATTGTAAGTGACCGAATGATTGAAAACGAGAAGTTGGAAAAGAAGTTGAAGCCTCTAGGTTTGACTGTTTGTGAAATAAAGCCTGACGGGCACTGCCTCTATAGAGCCGTTGAAGATCAGCTGGCTGTCCTCTCTGGTGGTAGATCACCTTATACATACCAAGGACTTCGGGAAATGGTGGCTGCTTACATGAGAAAGCATACATCTGATTTCCTTCCATTTTTCCTGTCAGAGAATTTAATTGAGGATGATTCTAATGAATCACTTGCTGAGAAGTTTGAAAATTACTGTAAAGAAGTGGAGTCCACAGCTATATGGGGAGGGCAACTAGAGCTTGGTGCCTTGACTCACTGCTTGAAGAAGCATATTATGATATTTTCAGGATCCTTCCCAGATGTGGAGATGGGCAAAGAGTATAAATCTGATGGTGGCACTGGCTTGTCCAATTCGAGTATCATGCTTTCTTATCATAAGCATGCTTTTGGGCTAGGAGAGCATTATAATTCTGTGGTCCCAACATGA 876 0.4338 MSKKEISQLQKKEVEMKKAAARGSKAEQKAKKKQVEEEVSQLSTKLKENHAKELAALGYSSGNGNEKSNLDTLVKAIAGVSVASQPEHTKVSKAKQRRDKRAQQEAEREQRIQAEQTDIVSDRMIENEKLEKKLKPLGLTVCEIKPDGHCLYRAVEDQLAVLSGGRSPYTYQGLREMVAAYMRKHTSDFLPFFLSENLIEDDSNESLAEKFENYCKEVESTAIWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSDGGTGLSNSSIMLSYHKHAFGLGEHYNSVVPT 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02169 291 FunFam Cysteine proteinases superfamily protein 125 290 - -
Vimu6g02169 291 Gene3D - 125 290 - -
Vimu6g02169 291 SUPERFAMILY Cysteine proteinases 107 290 IPR038765 -
Vimu6g02169 291 ProSiteProfiles OTU domain profile. 139 291 IPR003323 -
Vimu6g02169 291 MobiDBLite consensus disorder prediction 84 111 - -
Vimu6g02169 291 Coils Coil 9 52 - -
Vimu6g02169 291 MobiDBLite consensus disorder prediction 90 111 - -
Vimu6g02169 291 PANTHER OTU DOMAIN CONTAINING PROTEIN 10 290 - -
Vimu6g02169 291 CDD OTU_plant_OTU5-like 130 289 - -
Vimu6g02169 291 MobiDBLite consensus disorder prediction 1 44 - -
Vimu6g02169 291 Pfam OTU-like cysteine protease 145 285 IPR003323 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02169 K18342 - gmx:100780620 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02169 6 19091457 19094662 Vimu6g02169 6 19091457 19094662 ECH