Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02167 ATGGACTTGAAACCATTGATTGCAGAGAAGCCAGTGGTGATCTTCAGCAAGAGCAATTGTTGCATGAGCCACACAGTGGAGGCTCTGATACGCAGCTTTGGTGCCAACCATGCAGTTATTCAGGTTGACAAAATGGCAAGTGGCCAACAAGTAGAGAGGGCACTGCTCCAGCTAGGCTGCCGCCCCAGTGTGCCTGCAGTGTTCATAGGACAAGAATTCATAGGTGGTGCTGATGAAGTATTCAAACTAAATGTTCAGAACAAGCTTGCCCAATTGCTGCTCGAGGCTAAAGCCATATTTCTCTGA 306 0.4804 MDLKPLIAEKPVVIFSKSNCCMSHTVEALIRSFGANHAVIQVDKMASGQQVERALLQLGCRPSVPAVFIGQEFIGGADEVFKLNVQNKLAQLLLEAKAIFL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02167 101 CDD GRX_GRXh_1_2_like 11 92 - -
Vimu6g02167 101 NCBIfam glutaredoxin-like family 5 100 IPR011905 -
Vimu6g02167 101 ProSiteProfiles Glutaredoxin domain profile. 1 100 - -
Vimu6g02167 101 PANTHER GLUTAREDOXIN 4 100 IPR011905 -
Vimu6g02167 101 PRINTS Glutaredoxin signature 57 70 IPR014025 -
Vimu6g02167 101 PRINTS Glutaredoxin signature 71 84 IPR014025 -
Vimu6g02167 101 PRINTS Glutaredoxin signature 12 30 IPR014025 -
Vimu6g02167 101 Gene3D Glutaredoxin 1 100 - -
Vimu6g02167 101 Pfam Glutaredoxin 12 74 IPR002109 -
Vimu6g02167 101 SUPERFAMILY Thioredoxin-like 4 98 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02167 Vimu-Chr6 19081900 19082205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02167 2 101 Miscellaneous Gene Families AT4G15690 46.000 5.29e-32 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02167 K03676 - gmx:100803979 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02167 6 19081900 19082205 Vimu6g02167 6 19081900 19082205 ECH