Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02163 ATGCTTGACCGCATCACCAATTCCGCTTCTCCCTCTCTTCTCCTCCTACCACGTCTTCTCTCTCACCAACAACCCTTCCCTTCTTCAAATTTCAAATTCCCTTTCCCACTCTCACCAAAACGTCTCACTCTGAACCTCATCCCCATGGCTTCCTCTCATTCCCTCCACAACCACACAAACCGACTCGCTTCCGAACAGAGTCCTTACCTTCTTCAACACGCACACAACCCTGTTGATTGGTATCCGTGGGGCGAAGAAGCCTTCGCCGAAGCGCGCAGGCGCGACGTGCCTATCTTCTTATCTACTTTGCCTGTGGTGTTCTTGGCGGCGATTCTGTTCGAAGTTGGCTACAGCACTTGTCACTGGTGTCACGTTATGGAGGTCGAGTCTTTCGAAGACGCAGCGGTTGCCAAGTTGTTGAACGATTGGTTTGTTAGCATTAAGGTGGATCGAGAGGAACGACCAGATGTTGATAAGGCTTTGTACGGTGGAGGAGGTTGGCCTCTGAGTGTGTTTCTTTCCCCCGACTTGAAGCCTTTAATGGGTGGAACTTACTTCCCCCCTGATGATAAGTACGGGCGACCTGGATTTAAGACTATACTAAGAAAGGTAAAACAGGCTTGGGATAGTAAGAGGGATATGCTGATTAAGAGTGGAGCATTTGCAATAGAACAGCTTTCTGAAGCAATGTCTGCTAGTGCAGATACTGATAAACTGCCCGATGGGGTTCCGGCTGATGCATTACGTCTGTGCTCAGAGCAGCTCTCTGGGTCCTATGATCCAAAGTTTGGTGGGTTTGGATCTGCACCAAAGTTTCCTAGACCAGTTGAGATAAACTTGATGCTTTATCACTCCAAAAAGTTGGAGGAGACAGGAAAATTGGATGGAGCTAATGGAAGTCAGAAAATGGTTTTCTTTAGCTTGCAATGCATGGCAAAAGGCGGGATTCATGATCATATTGGAGGTGGCTTTCACAGATACAGCGTGGATGAGTGCTGGCACGTTCCACATTTTGAGAAGATGCTATATGATCAAGGGCAGCTTGCTAATGTTTATCTAGATGCGTTTTCTATCACTAAAGATAACTTCTATTCATATATATCACGGGGTATCCTTGACTATTTAAAGAGAGATATGATTGGTCCAGAGGGTGAAATCTTTTCAGCAGAGGATGCTGACAGTGCAGAGACTGAAGGAGCTGCAAGAAAAAAGGAAGGAGCCTTTTACATATGGGAAAGCAAACAGGTTCAAGACATACTTGGAGAGCATGCTGCTCTTTTTGAGGAGCACTATTACATAAAGCAATCGGGTAACTGTGACCTGTCTGAAATGAGTGATCCTCACAATGAATTCAAAGAAAAGAATGTCCTAATTGAGAGAAAGGAACCTTCAGAACTGGCATCAAAATATGGCATGTCAGTTGAGACGTATCAAGAAATTCTGGGAGAATGTAGGCGTAAGTTGTTTGAAGCAAGGTCAAGGCGTCCAAAGCCACATTTGGATGACAAGGTTATTGTATCTTGGAATGGATTGGCGGTCTCTTCTTTTGCCAGGTCTTCTAAGATTCTCAAGGGCGAAGTGGAAGGGTCCAAATTCTACTTTCCTGTTGTTGGCACTGAGCCAAAGGAGTACTTGAAAATTGCAGAAAAAGCAGCATTTTTTATTAGGAAGCATCTTTATGATGTGGAGACTCGCAGGCTATACCATAGTTTCAGACGTTCTCCATCTAAAGCTCCTGGTTTCTTGGATGACTATGCTTTTCTGATTTCAGGATTGCTGGATCTGTATGAGTTTGGTGGTGGAATTAGCTGGCTTCTATGGGCCATTGAATTGCAGGAAACCCAGGATGCTTTGTTTCTTGATAAGGCTGGAGGTGGATATTTCAATAATACAGGAGAAGATTCTTCAGTTCTCCTCCGTGTGAAGGAAGATCATGATGGGGCAGAACCATCTGGAAACTCGGTTTCTGCTATAAACCTTATAAGATTGGCTTCTATGGTTTCTGGAAGTAAGGCTGAGAATTATAAGCGAAATGCAGAACATCTATTGATCACTGGGTCAGTTGCAACTGACCAGAATTCTCTTGAAATGGCAATGCAGGCAGTTTTTGAGAAAAGATTGAAAGATATGGCTATGGCAGTGCCTCTAATGTGCTGTGCAGCAGACATGTTGCGTGTACCTTCTCGGAAACAAGTTGTCGTGGTTGGTGGAAGGACGTCTGAAGAATTTGAAAACATGCTTGCGGCAGCTCATGCATTATATGACCCCAACAGAACAGTTATTCATATAGACCCCAGCAACAAAGAAGAGATGGAATTTTGGGAAGTAAATAACAACAATGTCTCTCTCATGGCAAAAAATAACTATGACGTCCACAAGGTTGTAGCTCTTGTTTGCCAAAACTTCACCTGTAGCCCCCCCTTGACTGATCCTTCTTCACTTGAAGCTGTACTCTCCAAAAAACCTTCCTCTTAG 2475 0.4436 MLDRITNSASPSLLLLPRLLSHQQPFPSSNFKFPFPLSPKRLTLNLIPMASSHSLHNHTNRLASEQSPYLLQHAHNPVDWYPWGEEAFAEARRRDVPIFLSTLPVVFLAAILFEVGYSTCHWCHVMEVESFEDAAVAKLLNDWFVSIKVDREERPDVDKALYGGGGWPLSVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKVKQAWDSKRDMLIKSGAFAIEQLSEAMSASADTDKLPDGVPADALRLCSEQLSGSYDPKFGGFGSAPKFPRPVEINLMLYHSKKLEETGKLDGANGSQKMVFFSLQCMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDNFYSYISRGILDYLKRDMIGPEGEIFSAEDADSAETEGAARKKEGAFYIWESKQVQDILGEHAALFEEHYYIKQSGNCDLSEMSDPHNEFKEKNVLIERKEPSELASKYGMSVETYQEILGECRRKLFEARSRRPKPHLDDKVIVSWNGLAVSSFARSSKILKGEVEGSKFYFPVVGTEPKEYLKIAEKAAFFIRKHLYDVETRRLYHSFRRSPSKAPGFLDDYAFLISGLLDLYEFGGGISWLLWAIELQETQDALFLDKAGGGYFNNTGEDSSVLLRVKEDHDGAEPSGNSVSAINLIRLASMVSGSKAENYKRNAEHLLITGSVATDQNSLEMAMQAVFEKRLKDMAMAVPLMCCAADMLRVPSRKQVVVVGGRTSEEFENMLAAAHALYDPNRTVIHIDPSNKEEMEFWEVNNNNVSLMAKNNYDVHKVVALVCQNFTCSPPLTDPSSLEAVLSKKPSS 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02163 824 Pfam Protein of unknown function, DUF255 59 225 IPR004879 -
Vimu6g02163 824 Gene3D Glutaredoxin 57 235 - -
Vimu6g02163 824 SUPERFAMILY Thioredoxin-like 58 192 IPR036249 -
Vimu6g02163 824 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 50 821 IPR024705 -
Vimu6g02163 824 PIRSF UCP006402_thioredoxin 47 824 IPR024705 -
Vimu6g02163 824 Gene3D - 536 709 IPR012341 GO:0005975
Vimu6g02163 824 CDD SSP411 81 209 IPR004879 -
Vimu6g02163 824 SUPERFAMILY Six-hairpin glycosidases 254 648 IPR008928 GO:0005975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02163 - - gmx:100777751 1383.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02163 6 19051435 19057335 Vimu6g02163 6 19051435 19057335 ECH