Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02156 ATGGATTCTCGTTGCTTTGATGACTACAAAGAAGACGGTGAAGGTAGATATGCTGAAGGATTTGAAGACAAATTTGGAGATCCAGAAGTGCAGCCTCGCGTTGGGGAGGAATATCAAGCAGAAATTCCTCCATTGATTTCAGCACCTCATCGTTCTCTGCTTGTAAAGCAGATAAGAGATTCAGAAATCACTGTCAACTTGCAAGAGTGTATTTCACTAGGGCTTCCCATTCCTCTTAAGTGGGCACATTGCGAATTTGAAAGTAGTTCTGGTTACGGGAGTTTAGGATCTATCAGAAGCAAAGTGGGGCCAGCTATTTCTGAGAATGAATGCTCGGAAACTAAAGTGGAATTTTACGCTGCTTCAGACGGTGAAGAGACACATATAGGAGGGTTCTCAAATTTTGAACCATCTTCTAAAAGTGTTGAGAAGGATAAGATGAGAGGGAAGTATCTTCTCCCTGGACTGTTGGACGACCAATCTTGGACAAATACTGAATACAGCAGTTTTCTTCTTGGCCTCTATGTCTTTGGGAAGAAGCTTAATTTTTTGAAGAGATTTGTTGGGAGTAAAAGTATGGGAGACATATTGTCTTTGTATTACGGAAAGTTTTTTAAGTCTAAAGAATATTGTAGATGGGCAGAGTGCCGAAAGTTGAGAACTAAGCGCTGTATATATGGCCGGAAAATATTCACAGGATGGAGGCAACAAGAATTGCTGTCAAGATTATTTTCGTACTTGCCAAGGGAGTCTCACACTAGATTGCTTGAGATTTCAAGAAATTTTGGGGAGGGAAAGATGCCTTTTGAAGAATATGTGTTTTCTTTAAAGGATGCAGTTGGCATTGACTTGCTTATAGCTGCAGTAGGTATTGGTAAAGGGAAGCAAGATCTCACTGGCACTGCTGTTGAGCCAACAAAGACGAATCATATCTTCTCTGTTCGCCCTGAAATACCAATTGGCAAAGCTTGCTCCTCTCTTACATCTGCAGATATAATCAAGTTTCTCACAGGAGATTTTAGGTTGAGTAAAGCTCGATCTAGTGATCTCTTCTGGGAAGCTGTTTGGCCTCGGCTTTTAGCAAAAGGCTGGCATTCTGAACAGCCTAAAGATGTTTCTGGATCGAAGCAGTCTTTGGTTTTTCTTGTACCGGATATTAAGAAATTTTCAAGAAGGAAACTGGTAAAAGGTAGCCACTACTTTGATTCTATAAGTGATGTGTTGAATAAAGTAGCATCTGACCCTGGACTTCTTGAGACTGAAAGTCAAGCAACTGAGTGCAGTGTAGATAGGGAAAAAACTCCTGACAAACGAGACCTGGAGGGGGTGTCATTTGGGGAACAAGCTCAGTACCTTCAATCTCATCGTTCAAAGTGCAATCAAGATGTCAGGAAATTTACAATTGTAGATACCAGCATGGTTCATGATATGAATCAACGTAAAGTCATACAGATGAGAAGCTTACCTTCTGAAACTACAAATATATCTACCATCTCAAGCTGCTCTAGTGAATCTGAGAAAGATACATCTTACGAATCAAAAGATCAGGTTCAACAATATAGAGCTTTGAATGCTATCAAGGGTCATGTTGAGCAAGATAATGCTTCAAGTGCTATTGAAAACCAGGTTGAAAAATCTCATGTGTCAAGCTCTATTGATGAATGGGTCGAACAAGCTCATGCTTCAAGCCATATTCAACAAACTCATGCTTTGAGCCCTATTAAAGATCAGGTTGAACAAGCTCATGCTTCAAGCCTTATTGACGATCGGGTTGAACAAGCTCATGCTTCAGGCCCTATAAAAGATCGGATTGAACAAACTCATGCATCAAGCTCTGTTGAAGATCAATTTAAACAAGCTAAGTCTTTGTATCCTATTGAAGGTCAGGTTGAACAAGGTAATTCCTCCAACCCTATTGAAGAATTCTCTTATAAGGGGTTGTGTATAGACTCATCAGATTGTATTTGCGTTCCTGAGGCCCACAGCATCAATAAAGACGGAAAATATCATAGATTTCATTCCGATTTGCATAATGGTGAGCATTTAAGGGAGATCAATGAGCATTCCCTTATTCAAAAGATGACATCCGATTGCACAATTCCCTGCATCACGGGAATGCAGAAGTTAAGAGCTTGTAACCATCAAGAAAATAGTCACTGCACTAAAAGTACTTCTGTGGATAGAAACTTTGATTTAAATGAACCAATCTCGCCATCAAATCTGCAAGAAGCATCTGATGACATGGTTTTTTCTATGGGTTCTGGAAATTTGTCTTTACCAAATTATCTGGCTAAAGGTAGTCCGTCGAACATTAGCCATGAAGGTAGTGTCAGCGAGAACCGCCTGGTTAGAGAAGAGTCTGCAGAAAATTCTGAAACCAGGATGTTAATTGACTTGAATTTTCCTCAAGTTGCACCTGATTTAGGACTTGAAATGGAAATACCATCCTCTGGGGCAACAGTTCAAAATGACAATCAATTTGCAAATGCATCATCTTCTCCATCTGAGATAACACAATTCAATGCCACACATGAGTTTCCTGATGGAAACAATGAGCAGCAGTCTATCCTTGTCAACCGTCGTCAGAGCACTAGGAACCGACCGTTGACCACAAAAGCATTGGAAGCACTTGAGTACAGATTTATCAACTCAAAGAGGAAAAGAAAGAACACAGAATGTTCAGACAATAATCCAAAGTCCAAGTGTGTTCGTGTAAGTAGCGACACAATTGTTAGTGGCAATTGTGATGATGGCATTGAGGATTCTATGGTGGACACAAGAGCAGAGGAGGAGAATATTATCCAGGCATATAGTTATGGCATCGATCTTAATAGGGGCCCTCCGTAA 2847 0.4036 MDSRCFDDYKEDGEGRYAEGFEDKFGDPEVQPRVGEEYQAEIPPLISAPHRSLLVKQIRDSEITVNLQECISLGLPIPLKWAHCEFESSSGYGSLGSIRSKVGPAISENECSETKVEFYAASDGEETHIGGFSNFEPSSKSVEKDKMRGKYLLPGLLDDQSWTNTEYSSFLLGLYVFGKKLNFLKRFVGSKSMGDILSLYYGKFFKSKEYCRWAECRKLRTKRCIYGRKIFTGWRQQELLSRLFSYLPRESHTRLLEISRNFGEGKMPFEEYVFSLKDAVGIDLLIAAVGIGKGKQDLTGTAVEPTKTNHIFSVRPEIPIGKACSSLTSADIIKFLTGDFRLSKARSSDLFWEAVWPRLLAKGWHSEQPKDVSGSKQSLVFLVPDIKKFSRRKLVKGSHYFDSISDVLNKVASDPGLLETESQATECSVDREKTPDKRDLEGVSFGEQAQYLQSHRSKCNQDVRKFTIVDTSMVHDMNQRKVIQMRSLPSETTNISTISSCSSESEKDTSYESKDQVQQYRALNAIKGHVEQDNASSAIENQVEKSHVSSSIDEWVEQAHASSHIQQTHALSPIKDQVEQAHASSLIDDRVEQAHASGPIKDRIEQTHASSSVEDQFKQAKSLYPIEGQVEQGNSSNPIEEFSYKGLCIDSSDCICVPEAHSINKDGKYHRFHSDLHNGEHLREINEHSLIQKMTSDCTIPCITGMQKLRACNHQENSHCTKSTSVDRNFDLNEPISPSNLQEASDDMVFSMGSGNLSLPNYLAKGSPSNISHEGSVSENRLVREESAENSETRMLIDLNFPQVAPDLGLEMEIPSSGATVQNDNQFANASSSPSEITQFNATHEFPDGNNEQQSILVNRRQSTRNRPLTTKALEALEYRFINSKRKRKNTECSDNNPKSKCVRVSSDTIVSGNCDDGIEDSMVDTRAEEENIIQAYSYGIDLNRGPP 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02156 948 PANTHER ATROPHIN-RELATED 22 887 - -
Vimu6g02156 948 MobiDBLite consensus disorder prediction 768 791 - -
Vimu6g02156 948 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02156 Vimu-Chr6 18996951 19001129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02156 - - vum:124828118 1791.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02156 6 18996951 19001129 Vimu6g02156 6 18996951 19001129 ECH