Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02149 ATGGCAGCAAAGCCTGCAGAAGAACCTCCTCATGGAGAAACTCTCAAGTACCAGACGTGGGTTCTCAAAGTATTGATCCACTGCGATGGCTGCAGAAAGAGAGTCAAGAAAATTCTTCAAGGAATTGATGGGGTTTACAAAACAGAGGTGGATTCTCTGCAGCACAAGGTTACGGTCACTGGTAACGTGGACGCCGAGACTCTCATCAAGAGGCTTTCAAGATCAGGGAGGCTAGTGGAGCTTTGGCCAGAGAAACCAGCTGAGAAGAAAGATAATAAAAAGTCCGGAAAATCCAATAAGGGTGGTGATATCAACAAGGAGAAGGAAATCCAAAAGAATGGTGAACCAGGTGCTGATGGTGGTTCAAACGAGGGTTCTAAAGATGGTGGTTCAAATGAGGGTTCTAAAGATGGTGAAGATTCTGACAAAGAAGAACACAGTGATGAATGTGAGGAGGGAGGTGGTGGCGGCGGCGGCGGCGGTAGTGAAGGTGGCAAAAAGAAGAAAAAGAAAAAGAAGAAGAAGAACAACGGGGAAAACGGTGGTTCTGCATCTGTTCCTCCTAAGAATGGAGAAATTAGTAAAGTTGATGCATCAGTGCCTTCAATGGCTGCTAAGGATCTTGTTAACCCTCCAATTCAGCATGCCTACCCTTATCCACATGTGTATTATTCACCTCCTCCTGCTCCTCCAGCTTATGGATTAAGCTATAACACAGCATATCCTATCTCAAGTGCTTCATATTATGTTGGGGCACCCATCATGCCCATGCATGCTTACGCCACTCCATACTCTAGACTGCCACCACCTCCTCCACCGTCTGATCCAATCAAGCACTATGGTGCAGATGATGATGATGAAGATGAGTACGAAGGTGGTGGATATTGCTCCATCATGTGA 900 0.4611 MAAKPAEEPPHGETLKYQTWVLKVLIHCDGCRKRVKKILQGIDGVYKTEVDSLQHKVTVTGNVDAETLIKRLSRSGRLVELWPEKPAEKKDNKKSGKSNKGGDINKEKEIQKNGEPGADGGSNEGSKDGGSNEGSKDGEDSDKEEHSDECEEGGGGGGGGGSEGGKKKKKKKKKKNNGENGGSASVPPKNGEISKVDASVPSMAAKDLVNPPIQHAYPYPHVYYSPPPAPPAYGLSYNTAYPISSASYYVGAPIMPMHAYATPYSRLPPPPPPSDPIKHYGADDDDEDEYEGGGYCSIM 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02149 299 ProSiteProfiles Heavy-metal-associated domain profile. 17 80 IPR006121 GO:0046872
Vimu6g02149 299 MobiDBLite consensus disorder prediction 80 114 - -
Vimu6g02149 299 MobiDBLite consensus disorder prediction 80 198 - -
Vimu6g02149 299 Gene3D - 16 89 - -
Vimu6g02149 299 MobiDBLite consensus disorder prediction 130 152 - -
Vimu6g02149 299 CDD HMA 26 76 IPR006121 GO:0046872
Vimu6g02149 299 MobiDBLite consensus disorder prediction 266 299 - -
Vimu6g02149 299 Pfam Heavy-metal-associated domain 26 76 IPR006121 GO:0046872
Vimu6g02149 299 SUPERFAMILY HMA, heavy metal-associated domain 17 82 IPR036163 GO:0046872
Vimu6g02149 299 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 15 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02149 Vimu-Chr6 18961516 18962717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02149 - - gmx:100791626 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02149 6 18961516 18962717 Vimu6g02149 6 18961516 18962717 ECH