Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02142 ATGGCTTCCAATAACCTCAAACATCGACTCACACCGCATCCAGACACCGCCGCCAAAGACAACGGGATGATCGGAGACAAACGCCAGAAACGAAAGGTGATGGCCAAACGCGGCCTAAAGTCACTCACCATAGCTGTTACCCTCCCTTTCTCTCTCACCGTCTTATCAGCATGCATAGGGTCCTCTATCGCCGGTGATCATTCTCTCTCTACCAGAAGGCCCTTCTGGTTCCCACCCTCCTGGGCCCTGCACTTCACCTGCCCCGCCATAAGCTTCTTGATGGGTCTGGCCGCCTGGATGGTCTGGGCAGAAGGAGGTTTCCACCGAAACCCCATGGCTCTGTTGTTTTACTTTACTCAACTCCTTTTCGCGGTGCTCTGGGATCCCCTTGTGTTTGCTGCTGGGGCCACGCGGCTCAACCTGATGCTCTGTTTAGGGTTATTCGTGAGCCAGTACGGGTGCATGCGTGCGTTTCGCTCCGTCAATCCCATTGCTGCTGATTTGATAAAGCCTTGTCTGGCATGGGTTGCTTTTCTATCTATTGTTGGACGACGATTTGTGCTCTTTTATGTTGTTCGAATATGA 585 0.5265 MASNNLKHRLTPHPDTAAKDNGMIGDKRQKRKVMAKRGLKSLTIAVTLPFSLTVLSACIGSSIAGDHSLSTRRPFWFPPSWALHFTCPAISFLMGLAAWMVWAEGGFHRNPMALLFYFTQLLFAVLWDPLVFAAGATRLNLMLCLGLFVSQYGCMRAFRSVNPIAADLIKPCLAWVAFLSIVGRRFVLFYVVRI 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02142 194 Pfam TspO/MBR family 46 182 IPR004307 GO:0016020
Vimu6g02142 194 CDD TSPO_MBR 46 181 IPR004307 GO:0016020
Vimu6g02142 194 Gene3D TspO/MBR protein 37 188 IPR038330 -
Vimu6g02142 194 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 34 185 IPR004307 GO:0016020
Vimu6g02142 194 MobiDBLite consensus disorder prediction 1 22 - -
Vimu6g02142 194 FunFam translocator protein 2 38 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02142 Vimu-Chr6 18917889 18918659 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02142 K05770 - gmx:100785785 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02142 6 18917889 18918659 Vimu6g02142 6 18917889 18918659 ECH