Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02136 ATGGATGTTGAGGAACAACCTTCGCCCAACTCCACCAACGTTAAACGCTTCGGCCTTAAAAACTCTATTCAAACCAACTTCGGCGATGACTATGTTTTCCAAATTGTCCCAAAGTATGTACCTTCTTTTTCTTCCCCGTTTAAGCTCGTTGAATTCATGCTCAAACTCGATAGAAATGCAATGGCGGTTTCACTGTCAACGAGCGCAGTTAAACTATATTCACCTATGGCGGGTCAATATTTCGGAGAGTGCAAGGGTCACACCGCAACCATCAACCAGATTTTATTTTCGGGTCCTTCACACCACCAAGTTTTGTGTTCGTGCTCTTCTGATGGCACTATTAGAGCTTGGGACACACGCACATTTCAGCAGGTTTCTTGCATCAATGCGGGTTCTTCGCAGGAGGTTTTCAGCTTCTGTCTTGGAGGAACTAGTGGGAATTTAGTTGCCGCCGGGTGTAAATCGCAGATACTGTTCTGGGATTGGAGAAATATGAAGCAAATTGCATGCCTGGAAGACTCTCATGTAGATGATGTCACTCAGGTTCATTTTGTCCCCAACGAACAAGGAAAGCTTATTTCTGCTTCAGTAGATGGGTTGATCTGCACATTTGATACCAGTGGAGATATCAATGATGATGATCATCTAGAATCACTTACCCATGCTCTATTTCTGCCTGCTATGGTTGTATTCTGCACTTTCAATTTTGTTGCTGTTACTGAAGAAAGTATCTGGAACTGGAAAGATGGTAGAAATGAAGGAAACTTCTCAGATGCACGTACTTTAGCTTCTGAAAGTTGGAATTTGGACCATGTTGATTATTTCATCGATTGCCACTACAACAGAGAATCTGAAAAACTATGGGTGATTGGTGGCACTAATGCTGGTACTATGGGCTACTTTCCTGTAAATTACAAAGGAGTGGCAACAATTGGAGGTGCAGAAGCAATTCTTGAAGGTGGGCACACAGGTGTTATTAGGAGTGTTTTACCAATGTCAAAAATTCATTCTAACAGTCCTAGCCAAGGCATTTTTGGATGGACTGGTGGAGAAGATGGTCGGCTATGTTGTTGGCTATCTGATGATTCCTCTGAATCAAATCGATCTTGGATTTCAAGCACATTGATTATGAGACCAGAAAAAACTCGCAAGAAAAATCGTCATCAACCTTACTAG 1176 0.4226 MDVEEQPSPNSTNVKRFGLKNSIQTNFGDDYVFQIVPKYVPSFSSPFKLVEFMLKLDRNAMAVSLSTSAVKLYSPMAGQYFGECKGHTATINQILFSGPSHHQVLCSCSSDGTIRAWDTRTFQQVSCINAGSSQEVFSFCLGGTSGNLVAAGCKSQILFWDWRNMKQIACLEDSHVDDVTQVHFVPNEQGKLISASVDGLICTFDTSGDINDDDHLESLTHALFLPAMVVFCTFNFVAVTEESIWNWKDGRNEGNFSDARTLASESWNLDHVDYFIDCHYNRESEKLWVIGGTNAGTMGYFPVNYKGVATIGGAEAILEGGHTGVIRSVLPMSKIHSNSPSQGIFGWTGGEDGRLCCWLSDDSSESNRSWISSTLIMRPEKTRKKNRHQPY 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02136 391 SMART WD40_4 164 205 IPR001680 GO:0005515
Vimu6g02136 391 SMART WD40_4 77 118 IPR001680 GO:0005515
Vimu6g02136 391 SMART WD40_4 121 161 IPR001680 GO:0005515
Vimu6g02136 391 ProSiteProfiles Trp-Asp (WD) repeats profile. 84 127 IPR001680 GO:0005515
Vimu6g02136 391 PANTHER UNCHARACTERIZED 12 391 IPR039328 -
Vimu6g02136 391 Pfam WD domain, G-beta repeat 79 118 IPR001680 GO:0005515
Vimu6g02136 391 SUPERFAMILY WD40 repeat-like 54 358 IPR036322 GO:0005515
Vimu6g02136 391 ProSitePatterns Trp-Asp (WD) repeats signature. 105 119 IPR019775 -
Vimu6g02136 391 Gene3D - 52 232 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02136 K24758 - gmx:100787377 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02136 6 18888578 18892502 Vimu6g02136 6 18888578 18892502 ECH