Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02134 ATGGGCTACGGATTGGGCCGAAAGGGATATTGGGTTGGGCCAATATGCGATTGCGAGTTCAGGAAGGTGCTAGAAGTGTCGTATTTTACGGCATATAAATACCATTTCTTCAAAAGGAGCAGTTGTAACAGGGTTACTCTGGGTCGTCATCCTGAGGTTAAGTGGGCTCAGAGAGTTGACAAGGTCTATATCACGGTGCAATTGGCTGATTCAAAAAATGCTAAAGTGGATCTTACTCCTGAAGGCGTTTTTACCTTCTCTGGCAGTGCTGGCACTGAAGACCATCAGTATGAGCTAAAACTGGAGCTCTTTGAGAAGGTTAATGTAGAGGAGAGCAAAATTAATGTAGGAGTGCGAAGCATATTCTCTGTTGTGCAGAAGGCAGAGAATGGATGGTGGAAAAGGTTACTGCGTGCAGAAGGCAAGACTCCACATTATGTGAAAGTAGATTGGGATAAATGGGTGGATGAGGATGAAGAAGATGGCAGTGGTGAACCGGACTTGGGAGGAATGGATTTCTCGAAATTTGGAGGAATGGGTGCGGATGGAATGGGAGGGATGGATTTCTCTAAATTTGGTGGTGATGCAATGGATGATATTGATGAGAGTGATGATGAAGGTACGCGTGTGTGCTAA 636 0.4513 MGYGLGRKGYWVGPICDCEFRKVLEVSYFTAYKYHFFKRSSCNRVTLGRHPEVKWAQRVDKVYITVQLADSKNAKVDLTPEGVFTFSGSAGTEDHQYELKLELFEKVNVEESKINVGVRSIFSVVQKAENGWWKRLLRAEGKTPHYVKVDWDKWVDEDEEDGSGEPDLGGMDFSKFGGMGADGMGGMDFSKFGGDAMDDIDESDDEGTRVC 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02134 211 CDD p23_hB-ind1_like 51 159 - -
Vimu6g02134 211 Pfam CS domain 52 127 IPR007052 -
Vimu6g02134 211 SUPERFAMILY HSP20-like chaperones 50 193 IPR008978 -
Vimu6g02134 211 ProSiteProfiles CS domain profile. 48 137 IPR007052 -
Vimu6g02134 211 FunFam Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 48 169 - -
Vimu6g02134 211 Gene3D - 48 168 IPR008978 -
Vimu6g02134 211 PANTHER TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE 49 204 IPR045250 GO:0051879
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02134 Vimu-Chr6 18884526 18886402 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02134 - - ccaj:109812261 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02134 6 18884526 18886402 Vimu6g02134 6 18884526 18886402 ECH