Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02121 ATGGTTGTAGAATGTGGTGTAAGACTAGCGTGTGCTAAATATGCCGTGTACGGCATCGATTATGAAGGGCATGGACGTTCTGAAGGTGCTCGTTGTTACATAAAGAAGTTCGATAACATCGTTAATGATTGTTATGACTTTTTCAAGTCTGTCGGCGAGCTCCAAGAGTATAAGGGGAAGGCTAGGTTCTTGTATGGAGAGTCCATGGGAGGGGCAGTGAGCCTACTTTTGCACAGAAAGGACCCTTCATTCTGGGACGGCGCAGTTCTTGTTGCGCCCATGTGTAAGATATCAGAGAAAGTGAAGCCACACCCGGTGGTGATCAACATTTTGACTAAAGTGGAAGATATAATCCCAAAGTGGAAGATAGTTCCCACTAAGGATGTCATCAATGCAGCCTTCAAAGACCCTGCTAAAAGACAGAGGATAAGGAAAAACAAGTTGATATACCAGGACAAGCCCAGGCTAAAAACAGCACTGGAAATGTTAAGAACCAGCATGAGCCTAGAAGACAGCTTATATAAGGTGACCCTGCCTTTTTTTGTATTGCATGGAGAAGCAGATACAGTGACCGACCCAGAAATAAGCAGGGAATTATATGAGAGGGCAAGTAGCAAAGATAAGACCATAAAATTGTACCCAGGAATGTGGCATGGCTTAACATCAGGGGAGACAGATGAAAACATCGAAAAAGTTTTTGAAGACATTATAATTTGGCTAGATAAGCATACGGGCAATCCAACTCATTCTTCCACAGAACAAATTGAGACTTATAAGTATGACATTGAGAGATTGACTACAGTTACATCGTCAGCAAAGTTTGTAAAGCAAGAAAATGGGCGAAGAAGCTATCTCTGTGGCCTGAAAGGAAACCGCTTGTTATACCACTCAGCAATTTAG 900 0.4256 MVVECGVRLACAKYAVYGIDYEGHGRSEGARCYIKKFDNIVNDCYDFFKSVGELQEYKGKARFLYGESMGGAVSLLLHRKDPSFWDGAVLVAPMCKISEKVKPHPVVINILTKVEDIIPKWKIVPTKDVINAAFKDPAKRQRIRKNKLIYQDKPRLKTALEMLRTSMSLEDSLYKVTLPFFVLHGEADTVTDPEISRELYERASSKDKTIKLYPGMWHGLTSGETDENIEKVFEDIIIWLDKHTGNPTHSSTEQIETYKYDIERLTTVTSSAKFVKQENGRRSYLCGLKGNRLLYHSAI 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02121 299 Pfam Serine aminopeptidase, S33 7 223 IPR022742 -
Vimu6g02121 299 SUPERFAMILY alpha/beta-Hydrolases 8 247 IPR029058 -
Vimu6g02121 299 PRINTS Alpha/beta hydrolase fold signature 13 28 IPR000073 -
Vimu6g02121 299 PRINTS Alpha/beta hydrolase fold signature 64 77 IPR000073 -
Vimu6g02121 299 PRINTS Alpha/beta hydrolase fold signature 180 194 IPR000073 -
Vimu6g02121 299 PANTHER PHOSPHOLIPASE-RELATED 4 243 - -
Vimu6g02121 299 FunFam Alpha/beta-Hydrolases superfamily protein 1 247 - -
Vimu6g02121 299 Gene3D alpha/beta hydrolase 4 246 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02121 Vimu-Chr6 18813093 18814514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02121 1 299 Acyl Lipid Metabolism Gene Families AT2G47630 64.495 5.89e-150 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02121 K18368 - qsa:O6P43_007177 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02121 6 18813093 18814514 Vimu6g02121 6 18813093 18814514 ECH