Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02117 ATGCTTTCGTCCAAACCACCGCGTCGGAAAATTGTTCCGGCGAACGGAGATGAGTCCGCTGACAAACTTGACCAGCTTCTCTTGTCCTCCGCCATCTGCAACAACGAGGACATAGGCCCGTTCATCCGCAAGGCCTTCGCCTCCGGAAAGCCGGAGACGCTCCACCACCACCTCCGTCACTTTGCGCGCTCGAAGGAGTCCGAGATTGAGGAAGTGTGTAAGGCTCACTACCAGGACTTCATCCTCGCCGTCGACGATCTACGATCTCTCCTATCAGACGTCGATTCGCTGAAGTCATCCCTCTTCGATTCCAACTCGCGGCTCCAGTCCGTTGCGCGCCCGCTTCTGTCGTCGCTCGACGCCTTCGTCGAGACGCGGAACGTCTCGAAGAACGTGAACCTCGCCATCGACTCCATCCGCACTTGCGTCAAGCTGATGGAGGTTTGCACGCGCGCCAACCGCCACCTCGCGGACGACAACTTCTACATGGCGCTGAAGTGCGTGGACGCGATCGAGCGGGAGTATTTGGATAAAACGGAGTCATCCACGCTGAAGCGGATGCTGGAGAAGAAGATTCCAGAGATTCGATCGTACATCGAAAGGAAGGTGAACAAGGAGTTTGGGGACTGGTTGGTGGAGATCCGAGTCGTGAGTCGCAATTTAGGTCAATTGGCGATAGGTCAAGCCTCGTCAGCGAGGCAGAGAGAAGAGGATCTAAGAATTAAGCAGCGCCAAGCGGAGGAACAGAGTAGACTCAGCGTGAGAGACTGTATTTACGCTTTAGAGGAAGAGGAAGAAGACGAAATTATCGCTGGCGGGATCGGCGAAGACGGCGGTGGAGTCGCCGGGTTTGATTTGACTTCGTTGTACAGGGCATACCATATTCATCAGACTTTAGGGTTAGAGGATCGGTTTAAACGGTATTATTTCGAGAACCGGAAGCTTCAGTTGACTTCGGACTTTCAGGTCTCGTCGATGACTCCTTTTCTGGAGTCGCATCAAACGTTCTTTGCGCAGATTGCAGGGTTCTTTGTGGTGGAGGATCGCGTGTTCAGAACCGGAGGTGGGTTGATTTCAAAATTGGAGGTTGAGAATCTGTGGGAGATTGCTGTTAGTAAGATGTGTTCAGTGTTGGAGGATCAGTTCTCCAGAATGCAAACTGCTAATCATCTTTTGCTTATTAAGGATTATGTGAGTCTGTTAGGAGTAACCCTGCGGCGATACGGGTACCCCATTGATGCGTTGCTTGATGTTTTGAGCAAACACAGGGATAAGTACCACGAACTCCTTTTGTCTGATTGTAGGAAGCAGATTGCGGAGGCGGTTGCGGCTGATAAATTTGAGCAAATGCTGATGAAAAAAGAGTATGAGTATTCCATGAATGTGCTTTCTTTCCAGATACAGACTACTGATATCATACCAGCTTTTCCCTATGTTGCACCCTTTTCGACAACTGTGCCAGATTGTTGTCGGATTGTAAGGTCATTCATTGAGGATTCTGTGAGTTTCATGTCTTATGGGGGGCAGCTTGAGTTCTATGAAGTTGTTAAGAAATATTTAGACAGGCTTTTGATTGAGGTTTTGGATGAAGCTTTAGTGAAGCTTATCAATACCTCGATTAGTGGTGTCTCCCAGGCAATGCAAATGGCAGCGAATATGGCTGTCTTGGAGCGTGCTTGTGATTTTTTCTTCCGCCATGCTGCACAGCTTTCGGGTGTTCCCCTGAGAATGGTGGAGAGAAGCAGAAGGCAGTTTCCCCTAAGAAAAGCTCGTGATGCTGCAGAAGAGATGCTCTCTGGGCTACTCAAAGCCAAGGTTGATGGATTTATGACCTTGATCGAGAATGTAAATTGGATGTGTGATGAGGCTCCTCAGAGTGGAAATGAATATGTAAATGAGGTTATAATTTATTTGGAAATTTTGGTTTCAACTGCTCAACAGATATTGCCATCTCAAGTCCTTAAGAGAGTATTGCAAGAAGTTTTTGCTCACATATCTGACAAGATAGTTGGGACTTTAGTCAGTGATTCTGTTAAAAGGTTTAATGTCAATGCTATTAATGGAATTGAAGTAGATATTCGGCTCTTAGAATCATTTGCTGATAATCAGGCCTCTCTTTTCTCTGATGGGGATGTTGATGTTTTGAAAGCATCACTTACCAGTTCAAAGCAACTGATTAATTTGCTATTAAGTAATCATCCGGAGAACTTCTTGAATCCAGTGATAAGGGAGAGGAGCTACAACACTTTGGACCACAAGAAAGTGATGATTGTTTCAGAAAAGTTGAGGGATCCTTCAGATCGGCTCTTTGGAACCTTTGGTAGTCGTGGGGCCAGGCAGAATCCGAAAAGGAAATCGTTGGATACGTTGATAAAAAGACTTAAGGATGTTAGCTGA 2397 0.4706 MLSSKPPRRKIVPANGDESADKLDQLLLSSAICNNEDIGPFIRKAFASGKPETLHHHLRHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVDSLKSSLFDSNSRLQSVARPLLSSLDAFVETRNVSKNVNLAIDSIRTCVKLMEVCTRANRHLADDNFYMALKCVDAIEREYLDKTESSTLKRMLEKKIPEIRSYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEEEDEIIAGGIGEDGGGVAGFDLTSLYRAYHIHQTLGLEDRFKRYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVFRTGGGLISKLEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEAVAADKFEQMLMKKEYEYSMNVLSFQIQTTDIIPAFPYVAPFSTTVPDCCRIVRSFIEDSVSFMSYGGQLEFYEVVKKYLDRLLIEVLDEALVKLINTSISGVSQAMQMAANMAVLERACDFFFRHAAQLSGVPLRMVERSRRQFPLRKARDAAEEMLSGLLKAKVDGFMTLIENVNWMCDEAPQSGNEYVNEVIIYLEILVSTAQQILPSQVLKRVLQEVFAHISDKIVGTLVSDSVKRFNVNAINGIEVDIRLLESFADNQASLFSDGDVDVLKASLTSSKQLINLLLSNHPENFLNPVIRERSYNTLDHKKVMIVSEKLRDPSDRLFGTFGSRGARQNPKRKSLDTLIKRLKDVS 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02117 798 FunFam Exocyst complex component 412 580 - -
Vimu6g02117 798 Gene3D - 412 584 IPR042045 -
Vimu6g02117 798 PANTHER SEC15 15 796 IPR007225 GO:0006886|GO:0090522
Vimu6g02117 798 Pfam Exocyst complex subunit Sec15-like 458 762 IPR046361 -
Vimu6g02117 798 FunFam Exocyst complex component 590 737 - -
Vimu6g02117 798 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 590 737 IPR042044 -
Vimu6g02117 798 PIRSF Sec15 4 798 IPR007225 GO:0006886|GO:0090522
Vimu6g02117 798 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02117 Vimu-Chr6 18766915 18774453 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02117 K19985 - gmx:100796432 1455.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02117 6 18766915 18774453 Vimu6g02117 6 18766915 18774453 ECH