Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02109 ATGAAACTTTTTGCAAAATTCTTCTCGACCTTCGTTCTGTGTGTAGTTGTGATGGCACACCAAGTAGTTGCACTAAACTTATTGAATGAAAATCTAATTACTGGCAAGGAAACATTATTAAAAGGAAAGCTTCTAATCAATAAGGTATGCACAAAGTCTCCGACCAGAGACCTCTGCGTTGAGGTTCTCTCATCCGATCCATTAGTTAGCCCTACTGCTAACCTCAAAGACTTAGCAATCATTTCTCTTAGGTTTGCTGCCAGAAACGCTTCGGGCATCCTCAGTGATGCCAAAATTCTCATTGATGACGTCAACCTAGATCCTGATGTCCAACAAGGTTTGGCTGATTGCAAGGAGAACATTTTGGATGCAGAGAGCCAGCTAGAGGACACCATTGCCTCCTTGATGATCGGTTTGAAATCTGAGGCACAACGTTGGCTCAAAGCTGCCTTGGCTGCCATAGACACTTGCGATGCCTCCATCCCCGGAGATGATGACATTCTTTCTGTTGATAGTACTGTCTTCCGCAAGCTCTGCAACATTGCCATCACAGTTACTAAGCTCCTCGTTAGGTCAAATAAGTTATGA 588 0.4371 MKLFAKFFSTFVLCVVVMAHQVVALNLLNENLITGKETLLKGKLLINKVCTKSPTRDLCVEVLSSDPLVSPTANLKDLAIISLRFAARNASGILSDAKILIDDVNLDPDVQQGLADCKENILDAESQLEDTIASLMIGLKSEAQRWLKAALAAIDTCDASIPGDDDILSVDSTVFRKLCNIAITVTKLLVRSNKL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02109 195 SMART PMEI_2 41 185 IPR006501 GO:0004857
Vimu6g02109 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 189 IPR035513 -
Vimu6g02109 195 Pfam Plant invertase/pectin methylesterase inhibitor 45 183 IPR006501 GO:0004857
Vimu6g02109 195 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 182 - -
Vimu6g02109 195 NCBIfam pectinesterase inhibitor domain 39 189 IPR006501 GO:0004857
Vimu6g02109 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 190 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02109 Vimu-Chr6 18732488 18733075 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02109 - - vum:124824324 278.87