Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02102 ATGTCTACTCAGCCAAAACCAAAGCTTGGTAGGCTTCCCAGTATCAGAGATCGTGTTGAAGACACTCTCTCTGCTCATCGTAACGAACTCATTTCTCTTCTTTCCAGGTATGTGGCTCAGGGGAAAGGGATTTTGCAACCTCATAACTTAATTGATGAACTTGACAACATCCCTGGGGACGATCAAGCAAAGTTGGATCTTAAAAATGGCCCCTTCGGTGAAATTATCAGGGCAGCACAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCAATAGGAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTCTCTGAACTGAGCGTGGAGCAATTAAGCGTTGCTGAATATCTGAGCTTTAAGGAGGAACTTGTGGATGGAAAGAATAATGACAGTTTTGTACTGGAACTTGATTTTGAGCCATTCAATGCCTCATTCCCTCGTCCATCCCGTTCATCATCCATTGGCAATGGTGTCCAATTTCTCAATCGCCACCTTTCATCAATTATGTTCCGCAACAAAGATTCCTTGGACCCCTTGCTTGATTTCCTCCGAGCTCACAAGTATAAGGGCCATTACGAGGAATCAGTAATTGTGAAAATTTTCTCTCCCTTGTTGTCCATGTCACAGGCTCTGATGTTAAATGACAGAATACAGAACATTTCCAAACTCCAGACTGCTCTGGCCAAGACTGAGGATTATCTTAATAAGATTCCACGTGATACACCTTATTCAGAGTTTGAATACGAGTTACAAGGAATGGGTTTTGAGAGAGGATGGGGTGATACTGCTGAAAGGGTATTGGAAACGATGCATCTGCTACTGGATATTCTTCAAGCTCCTGATCCTTCTACCCTAGAGACTTTTCTTGGCAGAGTGCCAATGGTATTCAATGTTGTTATATTGTCTCCTCATGGCTTCTTCGGACAAGCCAATGTCTTGGGTTTGCCTGACACTGGTGGGCAGGTTGTTTATATACTAGATCAAGTGCGTGCCCTTGAGAATGAGATGATCCTTCGGATTAAGAAACAAGGACTAGATTTCACTCCTAGAATCCTGATTGTTACCAGGCTAATACCCGATGCAAAGGGGACAACTTGCAACCAACGACTAGAAAGAGTCAGTGGTACCGAGCACACTCATATTTTGCGAGTTCCATTCAGATCAGAGTCAGGAACTCTCCGTAAATGGATTTCAAGGTTTGATGTGTGGCCTTATCTAGAGACTTATTCAGAGGACGTTGCCAGTGAAATTGCTGCTGAGTTACAAGGCTATCCTGACTTCATCATTGGAAACTACAGTGATGGGAATCTTGTTGCATCTTTATTGGCTTATAAAATGGGAGTTACACAGTGCACCATCGCTCATGCACTTGAGAAGACAAAATATCCGGATTCAGATATATACTGGAAGAAATTTGATGACAAATATCACTTTTCATGCCAGTTCACTGCTGATTTAATAGCCATGAATAACGCTGATTTTATCATCACCAGTACCTACCAAGAGATTGCAGGAACGAAAAATACAGTTGGACAGTATGAGAGCCACACTGGTTTTACTCTTCCTGGGCTCTACAGGGTTGTCCATGGCATTGATGTTTTTGATCCCAAGTTCAATATTGTTTCTCCTGGAGCAGATATGTCAATATATTTCCCCTACTCTGAAAAGCAGAACAGGCTTACATCCCTGCACGGTTCCATTGAACAGCTACTGTATGATCCAACACAGACTGATGACTACATTGGAACACTGGAAGACAAGTCAAAGCCCATAATTTTCTCCATGGCAAGGCTTGACAGAGTGAAGAACATGACAGGATTGGTTGAATTATTTGGTAAGAGCAGCAAATTGAGGGAGCTGGTCAACCTTGTTGTAGTAGCTGGTTACATTGATGTAAAGAAGTCCAGCGACAGAGAAGAAATTGCAGAAATTGAGAAGATGCACGCTCTCATCAAAGAGTACAACTTAAACGGTGATTTTCGTTGGATTGCTGCTCAAACAAATAGGGCACGTAACGGGGAGCTGTATCGCTACATAGCAGACACACAAGGTGCTTTCGTTCAGCCTGCATTCTATGAAGCTTTTGGGCTTACAGTTGTGGAAGCCATGACCTGTGGACTCCCCACATTTGCTACTAGCAATGGTGGTCCAGCTGAGATAATCGAGCATGGTATATCAGGATTTCACATTGATCCTTATCACCCTGATCAAGCTTCAGAGCTATTGGTTGAATTCTTCCAAACCTGCAAGACTGACCCAAGCCATTGGAAGAAAATATCTGATGGTGGTCTTAAAAGAATTTATGAAAGCTACACTTGGAAGATTTATTCCGAAAGGCTCTTGACCTTGGCGGGAGTTTACAGTTTCTGGAAATACGTTTCCAAATTGGAGAGGCGTGAAACTCGAAGATATCTTGAGATGTTCTATATCCTCAAGTTCCGTGATTTGGCAAAATCTGTGCCCCTAGCAAAAGATGATGCAAGTTAA 2499 0.4282 MSTQPKPKLGRLPSIRDRVEDTLSAHRNELISLLSRYVAQGKGILQPHNLIDELDNIPGDDQAKLDLKNGPFGEIIRAAQEAIVLPPFVAIGVRPRPGVWEYVRVNVSELSVEQLSVAEYLSFKEELVDGKNNDSFVLELDFEPFNASFPRPSRSSSIGNGVQFLNRHLSSIMFRNKDSLDPLLDFLRAHKYKGHYEESVIVKIFSPLLSMSQALMLNDRIQNISKLQTALAKTEDYLNKIPRDTPYSEFEYELQGMGFERGWGDTAERVLETMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGFFGQANVLGLPDTGGQVVYILDQVRALENEMILRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSESGTLRKWISRFDVWPYLETYSEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTGFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSEKQNRLTSLHGSIEQLLYDPTQTDDYIGTLEDKSKPIIFSMARLDRVKNMTGLVELFGKSSKLRELVNLVVVAGYIDVKKSSDREEIAEIEKMHALIKEYNLNGDFRWIAAQTNRARNGELYRYIADTQGAFVQPAFYEAFGLTVVEAMTCGLPTFATSNGGPAEIIEHGISGFHIDPYHPDQASELLVEFFQTCKTDPSHWKKISDGGLKRIYESYTWKIYSERLLTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLAKSVPLAKDDAS 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02102 832 Gene3D - 151 298 - -
Vimu6g02102 832 PANTHER - 11 829 IPR012820 GO:0005985|GO:0016157
Vimu6g02102 832 FunFam Sucrose synthase 303 587 - -
Vimu6g02102 832 Pfam Glycosyl transferases group 1 587 751 IPR001296 GO:0016757
Vimu6g02102 832 NCBIfam sucrose synthase 27 826 IPR012820 GO:0005985|GO:0016157
Vimu6g02102 832 FunFam Sucrose synthase 151 298 - -
Vimu6g02102 832 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 318 786 - -
Vimu6g02102 832 Gene3D Glycogen Phosphorylase B; 550 777 - -
Vimu6g02102 832 Pfam Sucrose synthase 11 576 IPR000368 GO:0005985|GO:0016157
Vimu6g02102 832 Gene3D - 14 150 - -
Vimu6g02102 832 FunFam Sucrose synthase 14 150 - -
Vimu6g02102 832 Gene3D Glycogen Phosphorylase B; 303 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02102 Vimu-Chr6 18689142 18694040 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02102 7 830 Glycosyltransferase AT4G02280 79.976 0.0 1407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02102 K00695 - gmx:100793371 1512.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02102 6 18689142 18694040 Vimu6g02102 6 18689142 18694040 ECH