Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02038 ATGGCAAATAGACCGGATCCAGATATTGACGATGACTTTCGTGAGCTTTATAAGGAGTACACTGGCCCCCCAGGTTCTGCTGCTACGAACACGCAAGAGAGGGCAAAACCAAATAAGAGGTCTAATGCAGGTTCTGATGAGGAGGATGAAGGTCGGGACCCAAATGCTGTTCCCACTGATTTCACCAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCGAAGGCTACTGAAAGGAATTGGAAGAAAAGGAAGGAGGAGGAAATGATATGCAAGCTTTGTGGAGAATCAGGGCATTTCACTCAGGGCTGCCCATCTACCCTTGGAGCCAATCGCAAGTCTCAAGATTTCTTTGAAAGGATACCTGCTAGAGACAAAAATGTACGGGCACTTTTCACCGAGAAAGTTTTAAGCAAGATTGAAAGGGACATTGGTTGCAAAATTAAGATGGATGAAAAGTTTATCATTGTCAGTGGTAAGGATAGATTAGTTATGGCAAAAGGTGTTGATGCGGTACACAAGATTCGAGAAGAGGGTGAACAAAGGGGTTCATCTAGTTCTCAAATGACCCGATCAAGATCACCTGAGAGAAGTGAGAGAAGTCCGGTTAATGCACGGTTTCAACGCTCTGAGCCCCAAAGGTCTCATTCTGGACCACGTAATACATCTCAGTTTCAACAAAGGTTTGGTAGGCAGGAGAGGGCTGTTGAAGACCGAATCCGGGAGGATGTTCAAAAGCTTGCTAGAGGTTCTCCACAAGGTAGGGACAGCGTAGGATATATTTACAGCATCCTTAGAAAGCTGGTAATCAAATGTTCATAG 819 0.453 MANRPDPDIDDDFRELYKEYTGPPGSAATNTQERAKPNKRSNAGSDEEDEGRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKNVRALFTEKVLSKIERDIGCKIKMDEKFIIVSGKDRLVMAKGVDAVHKIREEGEQRGSSSSQMTRSRSPERSERSPVNARFQRSEPQRSHSGPRNTSQFQQRFGRQERAVEDRIREDVQKLARGSPQGRDSVGYIYSILRKLVIKCS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02038 272 MobiDBLite consensus disorder prediction 204 229 - -
Vimu6g02038 272 MobiDBLite consensus disorder prediction 39 55 - -
Vimu6g02038 272 PANTHER OS01G0252900 PROTEIN 1 253 - -
Vimu6g02038 272 MobiDBLite consensus disorder prediction 174 237 - -
Vimu6g02038 272 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Vimu6g02038 272 MobiDBLite consensus disorder prediction 1 77 - -
Vimu6g02038 272 MobiDBLite consensus disorder prediction 1 18 - -
Vimu6g02038 272 MobiDBLite consensus disorder prediction 24 38 - -
Vimu6g02038 272 ProSiteProfiles Zinc finger CCHC-type profile. 90 105 IPR001878 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02038 - - vun:114191959 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02038 6 18241036 18246625 Vimu6g02038 6 18241036 18246625 ECH