Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02034 ATGGAGGTGCATGAAGAAGCTGAGAAGGCGGGCATTTCTATCTTTGCTGTGATTATTTCTCATTCTGCATTTATGGCCATGGCAGCAGCTCCAACTCTGACCTCAATTCCTTCAAGAACAACCTTGAATCATCAAATCCATGGCCTTCAACTAAAATTATCAGTTTCCACTTTCAACCATCCAATCCAAAATAGAAGAAGGAGCCTTCGAATCCGATTATCATCTTCCCCCAATCAAAACCATAATCAGTCCTCTCCCGGATTATACTCCGCAAAGAAATTCGAGCTCACCGCATCCAACGTCGACCTTGTTCTCGAAGATGTTCGCCCTTACCTCATCGCAGACGGTGGCAACGTCGACGTGGTCTCCGTCGAAGACGGCGTCGTATCTCTCCGTCTTCAAGGAGCGTGCGAGAGCTGTCCCAGCTCCACCACAACCATGACGATGGGGATCGAGCGCGTTCTTAAGGAAAAATTCGGAGATGCCGTTAAGGACATTCGCCAGGTCTACGATAACCACCCCAAGGAGACAACTGTTGAGGCTGTGAATAGTCATCTTGATGTATTGAGACCGGCCATAAAGAATTACGGAGGCAGCGTGGAAGTGTTATCCGTTGAAGGTGAGGAGTGCCAGGTTAAGTATGTTGGACCAGACTCCATTGGATCCGGAATCAAAGCAGCCATCAAGGAGAGGTTTCCAGACATTCTCAATGTTACCTTCTCTTCCTAG 729 0.4801 MEVHEEAEKAGISIFAVIISHSAFMAMAAAPTLTSIPSRTTLNHQIHGLQLKLSVSTFNHPIQNRRRSLRIRLSSSPNQNHNQSSPGLYSAKKFELTASNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLRLQGACESCPSSTTTMTMGIERVLKEKFGDAVKDIRQVYDNHPKETTVEAVNSHLDVLRPAIKNYGGSVEVLSVEGEECQVKYVGPDSIGSGIKAAIKERFPDILNVTFSS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02034 242 FunFam NifU-like protein 3, chloroplastic 93 176 - -
Vimu6g02034 242 FunFam NifU-like protein 1 chloroplastic 177 240 - -
Vimu6g02034 242 Pfam NifU-like domain 102 161 IPR001075 GO:0005506|GO:0016226|GO:0051536
Vimu6g02034 242 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 99 171 IPR034904 -
Vimu6g02034 242 Gene3D - 93 177 IPR034904 -
Vimu6g02034 242 Gene3D - 178 240 IPR034904 -
Vimu6g02034 242 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 87 239 - -
Vimu6g02034 242 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 176 239 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02034 Vimu-Chr6 18217476 18218598 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02034 K22074 - gmx:100527356 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02034 6 18217476 18218598 Vimu6g02034 6 18217476 18218598 ECH