Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02027 ATGGCTGCGATCACGGGAACTCACGTGTTTAGTGTTGTTAGTTTCCACCTCAGGGAAGCCGAAATACCTTTAGCATGTTCCAGCTTAAGCCGCAAGCGTATTGGTGATTGTTCTCGGCGTAATGTGGTTCTAAGACGCAGAGGAAATACTTCGATTCTTCCCAAAATCAGAGCCCATAATATTCCAGGTACAAATGCACGTGTTCTCTATGGCTCTGGTTTGCTGAAAATGGGAATTCGCGGTGTCACTGTATCTGATGTCAGGGGCTTTGGTGCTCAGGGTGGTGCAAAAGAGAGGCAAGGAGGCTCTGAATTTTCTGAAGGAAATTTTGTTGCCAAAGTTAAAATGGAAATAGTAGTGGAAAAGAACCAGGTTGAGGCAGTGATTGACAAAATTATCGAGGAGGCGAGGACTGGGGAGATTGGTGATGGCAAAATTTTCTGTAAGCCCTGGAAATCTATCTAG 465 0.4516 MAAITGTHVFSVVSFHLREAEIPLACSSLSRKRIGDCSRRNVVLRRRGNTSILPKIRAHNIPGTNARVLYGSGLLKMGIRGVTVSDVRGFGAQGGAKERQGGSEFSEGNFVAKVKMEIVVEKNQVEAVIDKIIEEARTGEIGDGKIFCKPWKSI 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02027 154 ProSiteProfiles P-II protein family profile. 53 154 IPR002187 GO:0006808|GO:0030234
Vimu6g02027 154 SMART P_II_3 72 147 IPR002187 GO:0006808|GO:0030234
Vimu6g02027 154 Gene3D - 70 154 IPR015867 -
Vimu6g02027 154 SUPERFAMILY GlnB-like 74 151 IPR011322 -
Vimu6g02027 154 PANTHER NITROGEN REGULATORY PROTEIN P-II 72 150 IPR002187 GO:0006808|GO:0030234
Vimu6g02027 154 Pfam Nitrogen regulatory protein P-II 74 150 IPR002187 GO:0006808|GO:0030234
Vimu6g02027 154 PRINTS P-II protein signature 107 130 IPR002187 GO:0006808|GO:0030234
Vimu6g02027 154 PRINTS P-II protein signature 77 95 IPR002187 GO:0006808|GO:0030234
Vimu6g02027 154 PRINTS P-II protein signature 138 154 IPR002187 GO:0006808|GO:0030234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02027 - - gmx:100775624 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02027 6 18135464 18138768 Vimu6g02027 6 18135464 18138768 ECH