Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02015 ATGTATCGTATTGTGAGCAATGATCAAATTGCTGCTGACCTTAAAGAGCATGTTATCAAGCCTGTCATTCCGGAGAAGTACCTTGATGAAAAGACCATCTTCCACCTTAACCCTTCGGGCCGATTTGTGATTGGTGGTCCCCATGGTGATGCTGGTCTGACTGGAAGAAAGATCATCATTGATACCTACGGCGGCTGGGGTGCTCATGGTGGTGGTGCCTTTTCAGGCAAGGACCCCACGAAGGTTGACAGAAGTGGTGCGTATATTGTGAGGCAGGCTGCGAAGAGTGTTGTGGCAAATGGGCTTGCGAGAAGGTGCATTGTCCAAGTGTCTTATGCCATCGGTGTCCCTGAGCCATTGTCAGTGTTTGTTGACACTTATGGAACCGGAAAGATTCCAGACAAGGAGATTCTGGAGATTGTGAAGGAGAATTTCGACTTCAGACCTGGAATGATCACCATTAATTTGGACCTCAAGAAGGGTGGCCACAGGTTTTTGAAGACAGCTGCTTATGGACACTTCGGAAGGGATGACCTGACTTCACATGGGAAGTTGTCAAGCCACTCAAGTCAGACAAGTCTTAGGCCTAGAAACATGGGAAGTTGCTGA 609 0.4811 MYRIVSNDQIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMITINLDLKKGGHRFLKTAAYGHFGRDDLTSHGKLSSHSSQTSLRPRNMGSC 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02015 202 MobiDBLite consensus disorder prediction 182 202 - -
Vimu6g02015 202 SUPERFAMILY S-adenosylmethionine synthetase 5 43 IPR022636 GO:0004478|GO:0006556
Vimu6g02015 202 ProSitePatterns S-adenosylmethionine synthase signature 2. 70 78 IPR022631 GO:0004478|GO:0006556
Vimu6g02015 202 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 5 178 IPR002133 GO:0004478|GO:0005524|GO:0006556
Vimu6g02015 202 FunFam S-adenosylmethionine synthase 65 182 - -
Vimu6g02015 202 SUPERFAMILY S-adenosylmethionine synthetase 44 180 IPR022636 GO:0004478|GO:0006556
Vimu6g02015 202 Pfam S-adenosylmethionine synthetase, C-terminal domain 44 179 IPR022630 GO:0004478|GO:0006556
Vimu6g02015 202 Gene3D - 45 81 - -
Vimu6g02015 202 Gene3D - 82 180 - -
Vimu6g02015 202 Gene3D - 5 44 - -
Vimu6g02015 202 MobiDBLite consensus disorder prediction 184 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02015 Vimu-Chr6 18034077 18034685 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02015 K00789 - gmx:100777770 342.428