Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02014 ATGGCAACCGAAACCTTTCTCTTCACATCTGAGTCTGTGAACGAGGGTCACCCCGACAAGCTGTGCGACCAGATCTCTGATGCAGTGCTCGACGCGTGCCTTGCACAGGACCCTGACAGCAAGGTTGCCTGTGAAACATGCTCCAAGACTAACATGGTCATGGTCTTTGGGGAGATCACAACCAAGGCCGAAGTAGACTACGAGAAGATTGTCCGTGACACATGCCGCAGCATTGGATTCATCTCTGATGATGTCGGTCTTGATGCTGACAAATGCAAGGTGTTGGTCAACATCGAGCAGCAGAGCCCTGATATAGCCCAGGGTGTGCACGGCCACTTCACCAAGCGGCCGGAGGAGGTTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCCACTGACGAAACCCCTGAATACATGCCGCTCAGCCATGTCCTTGCAACCAAACTCGGTGCTCGCCTAACCGAGGTTAGGAAGAATGGTACCTGCGCTTGGTTGAGGCCAGATGGTAAAACACAAGTAACTGTTGAGTACTACAATGACAACGGTGCCATGGTTCCAGTACGTGTTCACACCGTTCTAATTTCCACCCAACATGATGAGACTGTGAGTAATGATCAAATTGCTGCTGACCTTAAAGAGCATGTTATCAAGCCTGTCATTCCGGAGAAGTACCTTGATGAGAAGACC 690 0.5116 MATETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTKAEVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIPEKYLDEKT 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02014 230 SUPERFAMILY S-adenosylmethionine synthetase 5 111 IPR022636 GO:0004478|GO:0006556
Vimu6g02014 230 ProSitePatterns S-adenosylmethionine synthase signature 1. 121 131 IPR022631 GO:0004478|GO:0006556
Vimu6g02014 230 Pfam S-adenosylmethionine synthetase, central domain 119 229 IPR022629 GO:0004478|GO:0006556
Vimu6g02014 230 FunFam S-adenosylmethionine synthase 119 138 - -
Vimu6g02014 230 SUPERFAMILY S-adenosylmethionine synthetase 117 230 IPR022636 GO:0004478|GO:0006556
Vimu6g02014 230 FunFam S-adenosylmethionine synthetase 1 13 118 - -
Vimu6g02014 230 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 2 230 IPR002133 GO:0004478|GO:0005524|GO:0006556
Vimu6g02014 230 CDD S-AdoMet_synt 7 230 - -
Vimu6g02014 230 Gene3D - 13 134 - -
Vimu6g02014 230 FunFam S-adenosylmethionine synthase 139 230 - -
Vimu6g02014 230 Gene3D - 135 230 - -
Vimu6g02014 230 Pfam S-adenosylmethionine synthetase, N-terminal domain 6 103 IPR022628 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02014 Vimu-Chr6 18023956 18025736 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02014 K00789 - gmx:100812341 462.996