Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02010 ATGGCCACCATGGGGATAGTGACCAAACAGCATCTGCTAACCTACATGTATCTTCTAGTTTACATTACACTTTCATCAGGGGTTATTCTTTACAACAAGTGGGTTCTCTCTACATTATATTTTAATTTTCCATTTCCAATAACACTCACTATGATCCATATGGCTTTTTCTGGTGGTCTGGCCTTTTTGCTTGTCCGTGTTTTTAAGGTTGTGTCACCAATTAAAATGACCTTCAATATATATGCGACTTGTGTGGTCCCAATAAGTGCCTTCTTTTCCGCTAGTCTGTGGTTTGGGAATACTGCTTATCTGTTCATTTCTGTGGCCTTCATCCAGATGCTTAAGGCCCTCATGCCAGTGGCAACATTTCTCGTGGCTGTAACTTGTGGAACTGAGAAATTGAGGTGTGATGTATTCTGGAACATGGTGCTGGTCAGTGTTGGAGTTGTCATTTCCTCCTATGGAGAAATTCAATTTAATGTGCTCGGCACAGTTTATCAGGTCACAGGAATTGTTGCTGAGGCTTTGAGGCTGGTATTAACTCAAGTTCTTCTTCAGAAAAAGGGCTTGACACTAAACCCTATTACCAGCTTGTATTACATAGCACCCTGCAGCTTTGTATTTCTTTTCATCCCGTGGTACATCCTTGAGAAGCCTGAGATGGAAGATCCACATATGCAGTTTAACTTCTGGATATTTTTCTCAAATGCTGTTTGTGCTTTCGCATTGAATCTTTCCACATTCTTAGTGATTGGTAGGACTGGGGCAGTAACTATTAGGGTGGCTGGTGTTTTGAAAGACTGGTTACTTATCACTCTATCAACTGTCTTATTTCCTGAATCAAAGATTACTGGGCTTAATATTATTGGCTACGCTATTGCTTTAATTGGTGTCGTTATGTACAACTACCTTAAGGTCAGAGATGTTCGCACGTCTCAACTTCAAAGTTCCCAGGATGGATCACCAAAGGAGCTGCAGACAGAGAAAAAAGCAGTTGTTGACATGGACAACAGAGAGGAGACTTTATGGAATGATTCAGTTTCTGATACTAATTTTGATGAAGAAGCACCTTTAATGGCTTCGTCACGAACATCTCATCTTGGAATTGGACGAAAACCAGCTTAG 1125 0.408 MATMGIVTKQHLLTYMYLLVYITLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGGLAFLLVRVFKVVSPIKMTFNIYATCVVPISAFFSASLWFGNTAYLFISVAFIQMLKALMPVATFLVAVTCGTEKLRCDVFWNMVLVSVGVVISSYGEIQFNVLGTVYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFIPWYILEKPEMEDPHMQFNFWIFFSNAVCAFALNLSTFLVIGRTGAVTIRVAGVLKDWLLITLSTVLFPESKITGLNIIGYAIALIGVVMYNYLKVRDVRTSQLQSSQDGSPKELQTEKKAVVDMDNREETLWNDSVSDTNFDEEAPLMASSRTSHLGIGRKPA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02010 374 MobiDBLite consensus disorder prediction 315 374 - -
Vimu6g02010 374 MobiDBLite consensus disorder prediction 323 343 - -
Vimu6g02010 374 MobiDBLite consensus disorder prediction 344 358 - -
Vimu6g02010 374 PANTHER SOLUTE CARRIER FAMILY 35 14 310 - -
Vimu6g02010 374 Pfam Triose-phosphate Transporter family 16 302 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02010 Vimu-Chr6 17992127 17999945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02010 1 368 Organic Solute Cotransporters AT3G17430 74.865 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02010 - - gmx:100779373 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02010 6 17992127 17999945 Vimu6g02010 6 17992127 17999945 ECH