Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01973 ATGCTGCGTCTGAAAGCGTTTCGGCCTACGAGCGACAAAATCGTTAAGATCCAATTGCATCCGACGCATCCATGGATGGTTACGGCCGATGATTCAGATCGAGTTTCGGTTTGGAACTGGGAGCACCGCCAGGTGGTATATGAGTTGAAAGCTGGTGGAGTGGACGAGCGGCGTTTGGTCGGCGCCAAGTTGGAGAAGCTGGCCGAGGGAGAAATAGAGTCTAAAGGAAAGCCTACCGAAGCCATTCGGGGAGGAAGTGTTAAGCAGGTGAATTTTTATGATGATGATGTACGCTTTTGGCAACTTTGGCATAATCGTTCTGCAGCTGCTGAGGCTCCAACAGCTGTCCACACTTCAGCTTTTAGCTCTCCTGCCCCATCAACAAGAGGGAGACATTTTCTTGTCATATGTTGTTTAAACAAAGCTATATTTTTGGACTTGGTGACCATGCGTAGCCGTGATGTACCAAAGCAAGAGCTTGATAACAAGTCCCTTCTTTGCATGGAGTTCCTTTATAGAACTGGTGTTGGTGATGGTCCTCTTGTTGCTTTTGGTTCATCGGATGGTGTCATTAGAGTTCTCTCAATGATGACATGGAAGCTTGTGCGAAGGTACACTGGAGGTCATAAAGGATCGATCTCTTGTTTGATGTCCTTCATGGCTGCTTCTGGCGAGGCTCTTCTGGTTTCGGGCGCTAGTGATGGATTGCTCATAATTTGGAGTGCTGACCACGGACAGGATTCACGTGAACTTGTACCCAAGCTGAGTTTAAAAGCACATGATGGCGGGGTTGTGGCAGTTGAGTTGTCTAGGGTAATGGGAGGTGCTCCTCAGCTAATCACAATTGGTACAGATAAGACATTAGCCATATGGGACACTGTGTCCTTTAAGGAGCTGCGGCGGATAAAGCCAGTTCCCAAATTGGCTTGCCATAGTGTGGCTTCTTGGTGCCATCCTCGAGCTCCAAACCTTGATATTCTAACCTGCGTCAAAGATTCTCACATATGGGCAATCGAACATCCCACTTATTCTGCTCTCACGAGGCCATTGTGTGAATTGACCACAGTTATTCCTCCACAAGCCCTTTCTCCTAATAAGAAATTGAGGGTGTATTGTATGGTTACACATAATTTGCAGCCACATCTAGTTGCTACAGGAACCAACATTGGTGTTATCATCTGTGAGTTTGATGCTAGATCTCTTCCACCTGTTGCTCCTCTACCAACACCAGCAGACAGTAGAGAGCATTCTGCCGTATTTGTAATTGAAAGAGAATTGAAGCTATTAAATTTTCAGTTAAACAACTCTGCAAATCCATCTCTTGGAAATAACAGCTCCTTGTCAGAAACAGGAAGACCCAAGGGAGACTTTTTTGAACCATTATCTGTCAAGCAGGGGAAAAAACACATTAGTACTCCTGTTCCACATGATTCGTACTCAGTTCTTTCTGTCAGCAGTTCAGGAAAGTATCTAGCAATTGTTTGGCCAGATATTCCTTATTTCTCTGTCTACAAGGTTAGTGATTGGTCAATTGTTGACTCTGGAAGTGCGAGGCTTCTGGCATGGGATACTTGTCGTGACAGATTTGCTATATTGGAATCAGCATTACCTCCTAGAATTCCTATAATGCCCAAGGGTAGTTCATCAAAAAGAGCCAAAGAAGCTGCTGCGGCACAAGCAGCAGCAGCAGCAGCAGCTGCTGCTTCCACGGCTTCTGTTCAAGTCCGCATCTTGTTAGATGATGGTACATCAAATATACTAATGAGGTCTGTTGGCGCACGCAATGAACCAGTCATTGGTTTGCGTGGAGGAGCACTGCTTGGTGTTGCCTATCGAACATCTAGGAGAGTCAGTCCTATTGCTGCCACCGCTATTTCAACAATCCATTGGGAGACATTCCAGCCAGTGGGGGACCTTCTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACCGTTGAGTACTGTGCATTTGGATACCAGCAATACATAGTCATATCTTCTTTGCGCCCTCAATATAGATATTTGGGAGATGTTGCAATCCCATATGCTACCAGTGCTGTTTGGCACAGGAGGCAACTGTTTGTGGCTACCCCAACTACTATCGAAATCGTTTTTGTGGATGCTGGGGTTGCTCAAATTGACATTGAAACTACGAAGATGAAAGAAGAGCAGAAAATGAAAGAAGCACAGGCAAAAGCTGTTGCTGAGCACGGAGAGTTAGCTCTAATTACTGTAGAAGGTCCTCAGTCTGCTAAGGAAGAAAGAATAGCATTGAGGCCGCCAATGTTGCAGGTGGTTCGGTTGGCTTCATTTCAGCATGCTCCTTCAGTGCCACCTTTCTTAACATTACCAAAACAATCTAGAGTTGATGGTGATGACTCTTGGTCAGCAACGGAAGAGAGAAAGACGGGTGAGGTGGCAGTTGGTGGTGGGGGTGTGGCTGTGGCAGTTACCCGTTTTCCAATGGAGCAGAAACGTCCAGTTGGGCCTCTTGTAGTTGTAGGTGTCAGGGATGGAGTTCTTTGGCTAATTGACAGGTACATGTGTGCTCATGCCTTATCCTTGAGTCATCCTGGAATTCGCTGCCGATGCCTTGCAGCTTATGGAGACGCTGTTAGTGCAGTAAAATGGGCAAGTAGACTTGGAAGAGAACACCACGATGATTTAGCACAATTTCTGCTAGGAATGGGCTATGCTACTGAAGCACTTCATTTGCCTGGAATATCAAAGAGGTTGGAGTTTGATTTGGCGATGAAGAGCAATGATTTGAAAAGAGCTCTTCATTGTCTTCTTACCATGAGTAACAGCCGGGATATAGGACAAGATGATACTCCTGGTCTTGGTTTGAATGACATTCTTAATTTATCAGATAAAAAACAAGAGAAAATATCAGATAAAAAAAAAGATATGGTTGACGGTGTTCAGGGTATCGTGAAATTTGCAAAAGAGTTCTTGGATCTTATTGATGCCGCAGATGCTACTGCACAGAGTGATATTGCGCGTGAGGCTCTGAAGAGGTTAGCTGCAGCAGGTTCAGTGAAAGGTGCTTTAGAAGGTCATGAATTGAGAGGGTTAGCATTACGTCTTGCAAATCATGGAGAGTTGACACGTCTAAGTGGTTTGGTTAACAATTTAGTCACGCTTGGCTTGGGAAGGGAAGCAGCATTTGCTGCTGCTGTTTTGGGTGACAATGCTCTGATGGAGAAAGCATGGCAGGATACAGGAATGCTGGCAGAGGCTGTGCTTCATGCTCATGCACATGGACGGCCAACTTTGAAGAACTTAGTGCAGGCTTGGAACCAAGCGTTACAGAGAGAGATTGAACCTACCCCATCTCAGAAGACAGATGCTGCAGCTGCGTTTTTAGCTTCTCTTGAGGAGCCTAAGCTCACAAGTTTGGCAGATGCTGGGAAGAAAGCACCTATTGAAATCCTGCCTCCGGGGATGATGTCTCTTAATGCTCCTATTTCCATCCAGAAAAAACCAGCTTCTTCTGCACAGAACTCCCAACAACCCCCAGACAAGCTATTGGCACTGGAAGCACCTCCTACAACCACAGCTGCACCAGAGAGTGCTACTCAGCAGCCTGAATCTACACCGGCGTCAGTTAGTGAGCCACCTCCATCAGAGTCTACCTCAGAGTCCACGCCAGCTCATGTAGCTGCTCCACCTCAACCAGAATCAGGTGAAACGACCGAAGCCGATGGGGTTCCTACCACTGGACCAGCTAGTGACGGAGGTCCAAATGTTAATGGTGAAACTGGTCAAGCAGAAACGTCTACAGGCAATCCAGCACTCCCAGAGGTTCTCCTACCTACAGTAGCAGCAGAGGTTTCGGAGACTTCTACTCCAAGTATAGCTGCAGTTCCTACAACAACTACAGTTCAGGCAAATGATCCCTTTATATGA 3909 0.4635 MLRLKAFRPTSDKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVVYELKAGGVDERRLVGAKLEKLAEGEIESKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAAAEAPTAVHTSAFSSPAPSTRGRHFLVICCLNKAIFLDLVTMRSRDVPKQELDNKSLLCMEFLYRTGVGDGPLVAFGSSDGVIRVLSMMTWKLVRRYTGGHKGSISCLMSFMAASGEALLVSGASDGLLIIWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGTDKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTTVIPPQALSPNKKLRVYCMVTHNLQPHLVATGTNIGVIICEFDARSLPPVAPLPTPADSREHSAVFVIERELKLLNFQLNNSANPSLGNNSSLSETGRPKGDFFEPLSVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESALPPRIPIMPKGSSSKRAKEAAAAQAAAAAAAAASTASVQVRILLDDGTSNILMRSVGARNEPVIGLRGGALLGVAYRTSRRVSPIAATAISTIHWETFQPVGDLLPQPEWTAWDQTVEYCAFGYQQYIVISSLRPQYRYLGDVAIPYATSAVWHRRQLFVATPTTIEIVFVDAGVAQIDIETTKMKEEQKMKEAQAKAVAEHGELALITVEGPQSAKEERIALRPPMLQVVRLASFQHAPSVPPFLTLPKQSRVDGDDSWSATEERKTGEVAVGGGGVAVAVTRFPMEQKRPVGPLVVVGVRDGVLWLIDRYMCAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFLLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALHCLLTMSNSRDIGQDDTPGLGLNDILNLSDKKQEKISDKKKDMVDGVQGIVKFAKEFLDLIDAADATAQSDIAREALKRLAAAGSVKGALEGHELRGLALRLANHGELTRLSGLVNNLVTLGLGREAAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQALQREIEPTPSQKTDAAAAFLASLEEPKLTSLADAGKKAPIEILPPGMMSLNAPISIQKKPASSAQNSQQPPDKLLALEAPPTTTAAPESATQQPESTPASVSEPPPSESTSESTPAHVAAPPQPESGETTEADGVPTTGPASDGGPNVNGETGQAETSTGNPALPEVLLPTVAAEVSETSTPSIAAVPTTTTVQANDPFI 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01973 1302 MobiDBLite consensus disorder prediction 1232 1263 - -
Vimu6g01973 1302 MobiDBLite consensus disorder prediction 1186 1219 - -
Vimu6g01973 1302 MobiDBLite consensus disorder prediction 1183 1267 - -
Vimu6g01973 1302 PANTHER TSET COMPLEX MEMBER TSTF 1 628 - -
Vimu6g01973 1302 Gene3D - 863 1120 - -
Vimu6g01973 1302 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Vimu6g01973 1302 Gene3D - 3 348 IPR015943 GO:0005515
Vimu6g01973 1302 SMART WD40_4 250 292 IPR001680 GO:0005515
Vimu6g01973 1302 SMART WD40_4 1 39 IPR001680 GO:0005515
Vimu6g01973 1302 SMART WD40_4 198 241 IPR001680 GO:0005515
Vimu6g01973 1302 SUPERFAMILY WD40 repeat-like 7 316 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01973 - - gmx:100786844 2228.75