Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01949 ATGAGTGAAGCAAAAGTAGAAGCAGAAGAGAAGTACAGAAGCATGAGCACCAATTCCAAAGCAATTAACGGCACGGGTTTTCCTCTTCCTTGCTGCCCCTCCTCAAATTCAAATGCATCATCTTCTTCACTTGATCTATGGTCACAAATCATCGCCGCTGAATCCCCCCAACCCCAACGAATCGACGTCGTTTACCGGAGAAGACACCCTCGCAACCCCCACAATCCTACCAACTCAAACCCTTCCGATCCTCCCCTACCGCGTCCTACTCGGCCGAGTTTGGATCCCAACAAGCGAGTCAGTTGGAATCGTTCGCTTTCCACCAGAGGGAGGACTAGTATTGCTGTTGGTGCTTGTATGGTTTACCAGCCTCAGTTGAAGAAGGACAAAAGGAAAGGAAAGCCTGCACTTCCCAAAGGGAAGCTTGTGCAACCTCCGAACGTTGAGAAGGAGAGGTTATACTTTGAAGAGGTTGATGCTTTTGAGTTGTTGGAGGAAAGCCCCTCACCCAAGAAAAGCACATGGATCACAGGTGATATGACACAAGAGGGACCTTTGCCAACTATATGCTCCAGATTAGAAAAATGGTTACACTCCAGAAGGTTGAACTCCTCCTACGGTCCCTCGACTACACTGTCCAAAATACTAGATGCTTCATCCACGCGTTTGGAAGGTATTCAAGATATTGATTTTAGTACTCCTGAATTGAGAATATTGGAAACAAATGAGAAAAACAATTCACTACCGCAAACCATTAAAACCGGAGATAGGAAAACTTCTGTTGGAAATGACATTCATCTGCGCCAAACAAATGAAAAGATGCTGTTTGCTCGTAGTGGTGAAGGATGTGAAGATATTAATGCTGCCGTTAAGAAACTTTCTCTGGCATCAACGTCATCTTCGGTGGACAATGACCACATTAGTCCATTTTCCGCTTTATTAGCAACCTGTGGACAGTCTGCACCTTCACTGTTACAAGATATCTTTTCTAGTGTCTCAAAAACTATTGTGAAAGTTGGTGAAGGAACATTTGGAGAAGCCTTCAAGGTTAATAACTATGTCTGTAAAATTGTTCCGTTTGACGGGGACTTCAGAGTGAATGGTGAAATACAAAAGAGATCTGAAGAATTACTAGAGGAGGTGCTTCTCTGCAAAACTCTCAATTTATTGAGAGGAAAAGTAGGAGCTTCTGATAATTTGTGCAGCGCATTTATCGATTGCGTAGAATTTAGAGTATGTCAGGGACCTTATGATGCGGAACTAATTCGAGCATGGGAAGATTGGGATCTAAAGCATGGTTCAGAGAATGATCATCCAAAAGAGTTTCCAGATAAACAGTGTTATGTGGTGTTCGTGCAAGAACATGGTGGCAAGGATCTTGAAGGTTTTGCCCTCCTGAATTTTGACGAGGCAAGGGCATTGCTGGCTCAGGTTACGGCTGGGCTTGCTGTGGCTGAGTCTGCGTTTGAATTTGAACACAGAGATCTTCACTGGGGAAATATACTTGTGGGCCGAAGTGACTCTGAAGCGTTGCAGTTCACTCTCGATGGCAGGAAGATGTTAGTCAAAACGTATGGTTTAATAATATCTATTATTGACTTCACTCTATCAAGAATAAACACAGGTGATAGAATACTGTATTTAGATCTTTCCTCTGATCCTGACCTATTTAAAGGACCGAAAGGGGATAAACAGTCAGAAACATATAGGAAGATGAAGGAGGTGACTGAAGATTGGTGGGAAGGAAGTTGTCCTAAAACAAACGTTTTATGGTTGATCTACTTGGTAGACATACTCCTCACGAAGAAATCATTTGAACGTACCTCGAAGCACGAGAGAGATCTACGCTCCTTTAAGAAACGCCTTGACAAGTATGATTCGTCAAAGGAAGCAATTCTTGATCCCTTCTTCACTGATTTGTTCATTGAGTCTGACGCAAAGGTTTAA 1947 0.4309 MSEAKVEAEEKYRSMSTNSKAINGTGFPLPCCPSSNSNASSSSLDLWSQIIAAESPQPQRIDVVYRRRHPRNPHNPTNSNPSDPPLPRPTRPSLDPNKRVSWNRSLSTRGRTSIAVGACMVYQPQLKKDKRKGKPALPKGKLVQPPNVEKERLYFEEVDAFELLEESPSPKKSTWITGDMTQEGPLPTICSRLEKWLHSRRLNSSYGPSTTLSKILDASSTRLEGIQDIDFSTPELRILETNEKNNSLPQTIKTGDRKTSVGNDIHLRQTNEKMLFARSGEGCEDINAAVKKLSLASTSSSVDNDHISPFSALLATCGQSAPSLLQDIFSSVSKTIVKVGEGTFGEAFKVNNYVCKIVPFDGDFRVNGEIQKRSEELLEEVLLCKTLNLLRGKVGASDNLCSAFIDCVEFRVCQGPYDAELIRAWEDWDLKHGSENDHPKEFPDKQCYVVFVQEHGGKDLEGFALLNFDEARALLAQVTAGLAVAESAFEFEHRDLHWGNILVGRSDSEALQFTLDGRKMLVKTYGLIISIIDFTLSRINTGDRILYLDLSSDPDLFKGPKGDKQSETYRKMKEVTEDWWEGSCPKTNVLWLIYLVDILLTKKSFERTSKHERDLRSFKKRLDKYDSSKEAILDPFFTDLFIESDAKV 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01949 648 ProSiteProfiles Protein kinase domain profile. 333 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g01949 648 MobiDBLite consensus disorder prediction 68 106 - -
Vimu6g01949 648 Pfam Haspin like kinase domain 293 630 - -
Vimu6g01949 648 FunFam serine/threonine-protein kinase haspin 456 639 - -
Vimu6g01949 648 MobiDBLite consensus disorder prediction 77 92 - -
Vimu6g01949 648 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 46 640 - -
Vimu6g01949 648 FunFam Serine/threonine-protein kinase haspin-like protein 322 455 - -
Vimu6g01949 648 Gene3D Transferase(Phosphotransferase) domain 1 456 637 - -
Vimu6g01949 648 MobiDBLite consensus disorder prediction 1 43 - -
Vimu6g01949 648 SMART DUF3635_2 554 637 IPR024604 -
Vimu6g01949 648 Gene3D Phosphorylase Kinase; domain 1 325 455 - -
Vimu6g01949 648 MobiDBLite consensus disorder prediction 15 43 - -
Vimu6g01949 648 SUPERFAMILY Protein kinase-like (PK-like) 338 577 IPR011009 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01949 K16315 - gmx:100790036 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01949 6 17513065 17518282 Vimu6g01949 6 17513065 17518282 ECH