Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01939 ATGGAGGGAGAAAGAAGGAAAAGAAAAATAGAAAATGAAGAAGAAAATGAGGAGCAGAAGATTGAAAGGTTCTTTGCTTTGATAAAGAGGACAAAAGATGTTCGCGATCGATTCTACAAGGAGACTAAGCAGATGGATGGAGAAAGGGAAAAGAGTATTTGGAACCCAAAGTTTGAAGTAGAAGACTTCATTGATTGTGGAGAAAAAATGCCAGAGACTGCTAAAGTTTCAGGTTCTCATCATCATGATCTTGCAGGTCCTTCACAGAAAGAGCTCGTACACGAAAAGAAAGAAGATTTGCAAGATGCAACACGATCGGTGCAGGCTGAGGAAGATAATGGTGAAGAGAAAGACAAAAGAAGTGAGCATTTAGACTTAAATCTTTCGTTATAA 393 0.3842 MEGERRKRKIENEEENEEQKIERFFALIKRTKDVRDRFYKETKQMDGEREKSIWNPKFEVEDFIDCGEKMPETAKVSGSHHHDLAGPSQKELVHEKKEDLQDATRSVQAEEDNGEEKDKRSEHLDLNLSL 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01939 130 PANTHER PROTEIN NEGATIVE REGULATOR OF RESISTANCE 4 130 IPR031425 GO:0010112
Vimu6g01939 130 Coils Coil 93 113 - -
Vimu6g01939 130 Coils Coil 7 27 - -
Vimu6g01939 130 MobiDBLite consensus disorder prediction 70 130 - -
Vimu6g01939 130 Pfam NPR1 interacting 13 127 IPR031425 GO:0010112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01939 Vimu-Chr6 17441939 17442331 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01939 - - vra:106757345 203.756