Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01938 ATGGTTCTCGTTGATGACCATCGAAGCCAAAGTTTGAATGCAAGTTTGTTGGTACCATACTTGGACGCCTTGTCCGGAACCTCATTCACAAATGGAGCAAACTTTGCTGTGGTGGGGTCCTCTACTCTCCCTAAGTATGTTCCTTTCTCCTTAAATATACAGCTGATGCAATTCCGGCGTTTCAAAGCTCGTTCTCTTGAACTTGTTACGGCAGGTGCAAGAAATTTCATCAGTGACGAAGGCTTCCGCAATGCACTCTACTTGATTGATATTGGGCAAAACGACCTTGCTGATTCATTTGCCAAAAATCTGTCATACGCACAAGTGATTAAGAAGATCCCATCATTTATTACTGAGATTGAGAATGCTGTTAAGGTAAGAGGGCAAAGAATTTTGTTCGTAACTGCTAAATTTCCTTTTATTGAAATAAGCTGCAGCAATGATCTTGGCTGGGAGAATTTACATAACGAAGGGGCCAGGAAGTTTTGGGTTCACAATACTGGGCCATTGGGCTGTCTTCCTAAAATACTTGCACTGGCTCAGAAGAAGGATCTAGATTCATTGGGATGTCTTTCTAGTTATAACACTGCAGCACGATTGTTTAATGAAGCGCTGCTTCATTTGAGTCAGAAACTAAGATCTGAACTGAAGGATTCTACTTTAGTCTATGTTGATATTTATGGCATTAAGCATGACCTCATTACAAATGCCGCAAAATATGGGCCTCCTTACAACTTTGACGCAAGGGTAACATGTGGTCAACCTGGTTATCAGGTTTGTGACGAAGGGGCTCGATATGTAAGCTGGGATGGAATTCATCATACTGAAGCTGCAAATAAGTGGATAGCTTCTAAGATACTTTCCATGGCTTATTCCACACCACGGACACCTTTTGATTTCTTTCGCCATTGA 912 0.4167 MVLVDDHRSQSLNASLLVPYLDALSGTSFTNGANFAVVGSSTLPKYVPFSLNIQLMQFRRFKARSLELVTAGARNFISDEGFRNALYLIDIGQNDLADSFAKNLSYAQVIKKIPSFITEIENAVKVRGQRILFVTAKFPFIEISCSNDLGWENLHNEGARKFWVHNTGPLGCLPKILALAQKKDLDSLGCLSSYNTAARLFNEALLHLSQKLRSELKDSTLVYVDIYGIKHDLITNAAKYGPPYNFDARVTCGQPGYQVCDEGARYVSWDGIHHTEAANKWIASKILSMAYSTPRTPFDFFRH 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01938 303 Gene3D SGNH hydrolase 3 292 IPR036514 -
Vimu6g01938 303 SUPERFAMILY SGNH hydrolase 84 288 - -
Vimu6g01938 303 Pfam GDSL-like Lipase/Acylhydrolase 13 286 IPR001087 GO:0016788
Vimu6g01938 303 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 4 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01938 Vimu-Chr6 17435074 17437921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01938 22 293 Acyl Lipid Metabolism Gene Families AT4G10950 21.107 2.01e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01938 - - gmx:100790553 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01938 6 17435074 17437921 Vimu6g01938 6 17435074 17437921 ECH