Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01934 ATGGCAAGAATGGTGGCACTCCAACAGAACCAACTATCTTTCTCTCCCTTGGCCTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCATACTCAACTTCAGTTGAAGAGAAAATTATGGCAGCCAAAAGGGTCTTTCTCGGTCTCTGCATCAAGCACCAAGAAAATCCTCATCATGGGAGGCACCAGGTTTATTGGAGTGTTTTTGTCTAGGCTCCTTGTCAAAGAGGGACACCAGGTGACTTTATTTACGAGAGGTAAAGCGCCTGTCACTCAACAATTGCCAGGTGAATCAGACGGTGATTATGCTGATTTTTCTTCCAAGATCTTGCATTTGAAAGGAGACAGGAAGGACTTTGACTTTGTAAAATCCAGTCTGTCAGCGGAGGGATATGATGTTGTTTATGACATAAATGGACGAGAGGCAGATGAAGTTGAGCCCATACTGGATGCTCTGCCTAATCTGGAACAGTTTATTTACTGTTCTTCGGCTGGTGTCTATCTCAAATCTGACCTATTACCTCATGCAGAGACTGATGCAGTTGATCCTAAGAGTAGGCACAAGGGAAAGCTTGAGACAGAAAGTTTGCTACAATCAAAGGGTGTTAATTGGACTTCAATAAGGCCAGTTTACATCTATGGACCCTTGAACTACAACCCTGTTGAAGAGTGGTTCTTCCATAGATTGAAAGCTGGTCGCCCAATTCCTATCCCTAGCTCAGGAATACAAATAACACAACTTGGTCATGTTAAGGATTTGGCAACAGCTTTCGTTCAGGTTCTTGGTAATGACAAGGCCAGGAAGGAAGTATTCAACATCTCGGGAGAGAAATATGTCACATTTGATGGATTAGCAAGAGCGTGTGCTAAGGCTGGTGGATTCCCAGAGCCAGAGATCGTTCACTACAACCCTAAAGATTTTGATTTTGGGAAAAAGAAGTCATTTCCATTCCGTGACCAGCATTTCTTTGCATCGATCGAGAAAGCAAAGAGAGTACTTGGGTGGGAACCTGAATTTGACCTTGTAGAAGGTCTTGCAGACTCATATAATCTGGACTTTGGTAGAGGAACATTCCGGAAAGAGGCTGATTTCTCAACAGATGACATTATTCTTGGCAAGAGTCTTGTTAGTGTATAA 1137 0.4318 MARMVALQQNQLSFSPLASSLSDFSGTRLHTQLQLKRKLWQPKGSFSVSASSTKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDGDYADFSSKILHLKGDRKDFDFVKSSLSAEGYDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGIQITQLGHVKDLATAFVQVLGNDKARKEVFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKDFDFGKKKSFPFRDQHFFASIEKAKRVLGWEPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVSV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01934 378 Gene3D - 51 351 - -
Vimu6g01934 378 CDD SDR_a1 54 307 - -
Vimu6g01934 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 53 360 - -
Vimu6g01934 378 Pfam NAD dependent epimerase/dehydratase family 56 273 IPR001509 -
Vimu6g01934 378 FunFam Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 52 351 - -
Vimu6g01934 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 54 350 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01934 Vimu-Chr6 17406277 17409925 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01934 - - gmx:100799721 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01934 6 17406277 17409925 Vimu6g01934 6 17406277 17409925 ECH