Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01885 TTGGATGTTTCACAGACAAAAGATGTGCTCAAAGACAAGTTCTATGACAAGACTAAAGTAACTAACATGGCTTCAAGAAGGTCACCACCCAAAGAAAGTAACATGGGTTCAAGAAGGTCTCCACCCAAAGAAAGTACATTGGCTCCACCAAAGTCTCCACCAAGGTCTCCACCCAAAGAAAATACTAAGCCTCAGGAATTCAAACTCCACACTCAAGAAAGAGCTGTCAAGCGTGCAATGTTCAATTATGCTGTGACAACAAAATTCTATATCATGGAGCTGCAAAAGAAACAAGAGGAGAGGCTGCAAAAGTTGATTGAAGAGGAAGAGGTTCGTTTGCTAAGGAAGGAAATGGTTCCAAGAGCTCAATTGATGCCTTATTTTGATAAGCCATTCTTCCCACAAAGATCAAGCAGGAGTGTTCCAAGAGAATCGTGCCTCCACATGATGAGCAGCAAGTGCTGGAGCTGCAGCGTTGGCAATGAAATTTACAGCTTGCACCACTATGGTCACCAAGCTCTCAAACCCATTAAGTAG 537 0.4302 MDVSQTKDVLKDKFYDKTKVTNMASRRSPPKESNMGSRRSPPKESTLAPPKSPPRSPPKENTKPQEFKLHTQERAVKRAMFNYAVTTKFYIMELQKKQEERLQKLIEEEEVRLLRKEMVPRAQLMPYFDKPFFPQRSSRSVPRESCLHMMSSKCWSCSVGNEIYSLHHYGHQALKPIK 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01885 178 MobiDBLite consensus disorder prediction 1 69 - -
Vimu6g01885 178 MobiDBLite consensus disorder prediction 1 20 - -
Vimu6g01885 178 PANTHER TARGETING PROTEIN FOR XKLP2 42 151 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Vimu6g01885 178 MobiDBLite consensus disorder prediction 21 41 - -
Vimu6g01885 178 Coils Coil 92 112 - -
Vimu6g01885 178 MobiDBLite consensus disorder prediction 46 60 - -
Vimu6g01885 178 Pfam Targeting protein for Xklp2 (TPX2) domain 67 139 IPR027329 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01885 Vimu-Chr6 17085242 17086427 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01885 - - gmx:100305850 296.975