Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01884 ATGATATGTTCAAGGCTCAGTAGGAGAACTCATCTCTTGCCATATCTTAGGGCTCTGCAAACGAACTCTCTTGAATCCAGATGCGTATCTATCCTTTCTAAAGGATCAAGTTACAGGTTCATTAATCCTAAAACCAGCTTCCAACACAATTTCTCTTGTAATATTCGGGTATCAAAGTTTAAACAAGAATTGTACCATCTGAGTTACCGTTCTTCAGCTCTTACTTCACAGAATGTTGGAAAGTCATGTTCCATTCCTGGTTTGCGACACTTCTCATCTCATGCATCCAAAGAGCAGAAGTCACAAAAAATGCTTTTATACTTGACGGGCTTAGTTTTTGCTATGGTTGGCTGCACGTATGCTGCTGTTCCCCTTTACAGGAGATTCTGCCAAGCCACTGGCTATGGGGGAACTGTCACCCGGCGTGAGGTACGGTTGAAGAAAAGATTGCTCGCCATGATAGCAATAAGACAGTCTCCACAAGGTGTTAATTTTTTTTTCTTATTGGATGTTGCCTTTTTACCATCACTCGTCATAGGATTAGTGTTTTCTTCAGGTTCATGGTTATTAGAAATAGCTGTTGAATTCCCAGCAGTTTTGAAAGAAAAAAAAAATAATCATTTCACTGTTTCTAATATGGTGGTTCAAATTATTCGAGCTGCTTTGTGTTCCTTCATTTATACTGGGAATATGTATGAGATGAACTTGCCTATTCTGTGTACCATCAACAGTAGTACCTCTAGTGCTCTTGTGATATGTCATGGGAAATTGTATGTAATGGTTCAGGAAATAGTGGTGCAGTTCAATGCTGATGTTGCTGATGGGATGCAATGGAAGTTTATTCCCACACAGAGAGAGGTTAGGGTCAAGCCTGGTGAAAGTGCCCTCGCATTTTATACTGCGGAAAATAAAAGTTCTACTCCAATAACAGGTGTTTCTACGTATAATGTGACTCCAATGAAGGCTGCAGTGTACTTCAATAAAATACAATGCTTCTGCTTTGAAGAGCAACGACTTCTTCCCGGAGAGCAGATTGACATGCCTGTATTTTTTTATATTGACCCGGAATTTGAGACGGATCCTAAAATGAATGGTATCAATAACATCATGTTATCATATACCTTCTTCAAGGTTTCTGAGGAATAA 1146 0.3944 MICSRLSRRTHLLPYLRALQTNSLESRCVSILSKGSSYRFINPKTSFQHNFSCNIRVSKFKQELYHLSYRSSALTSQNVGKSCSIPGLRHFSSHASKEQKSQKMLLYLTGLVFAMVGCTYAAVPLYRRFCQATGYGGTVTRREVRLKKRLLAMIAIRQSPQGVNFFFLLDVAFLPSLVIGLVFSSGSWLLEIAVEFPAVLKEKKNNHFTVSNMVVQIIRAALCSFIYTGNMYEMNLPILCTINSSTSSALVICHGKLYVMVQEIVVQFNADVADGMQWKFIPTQREVRVKPGESALAFYTAENKSSTPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPKMNGINNIMLSYTFFKVSEE 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01884 381 Gene3D Ctag/Cox11 257 381 IPR023471 -
Vimu6g01884 381 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED 79 379 - -
Vimu6g01884 381 Hamap Cytochrome c oxidase assembly protein CtaG [ctaG]. 67 381 IPR007533 GO:0005507
Vimu6g01884 381 FunFam COX11 cytochrome c oxidase assembly homolog 256 381 - -
Vimu6g01884 381 Pfam Cytochrome c oxidase assembly protein CtaG/Cox11 261 377 IPR007533 GO:0005507
Vimu6g01884 381 SUPERFAMILY Ctag/Cox11 259 380 IPR023471 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01884 K02258 - gmx:100820168 256.914