Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01882 ATGGCAGAAAATTCCGAAGGCAATGGTAATGGTAACAGCTTCTACGTTAAAGAAGAAGATGAAGAAGAAGTTAAGGTGAAGCAGAAGAAGAGAACAGTGGACGATTCCTTGCCGGAAGTCCTTAACCGCATCGCCTCCGCCATTCTCTTCCCGGGACCCGGTGACGATGGATCTGTAATTCGTCGGATCAAGGTCTCCGTCGCCGACAACGCTCCGCTCCTTCCGGAAGCTTCCAGAAACTTCGCCCGCGACGTTCTCCTCTGGTCTCGCGGCGGCACTCCCCTCCGCGCGCTCTTCGTAATCACCGTTGGGGCAATTGCTTTTGTTGCTTTAACAGGACTGCTAGTATTTATACTTTTCCTTCTCACTGCGACCATAAATGCCATAGTCATATCGCTGCTGATATCTTTGGTAGCTGCAGGAGGATTCCTGGCTCTTTTCTTTGCTCTTGTTACGGCTATCTACATCGGAGCATTATCAATAGCCATATTTGCAATTTCAGTTACTACATTTTGGGCATTTGTGGCTATTCTGATAATCACAGGCTGGACTGGATTCATCTATTCCGTGTGGGTGGTAACTAGAAAGAGCTTTGGATTTGCTAAACACTCGTTGGGCGTGACTGGCTCTGCAATTTCATCTTATACTGCTGCACGGCATGCCCGCTACATAATACACACAGATTCAAATTAG 693 0.4776 MAENSEGNGNGNSFYVKEEDEEEVKVKQKKRTVDDSLPEVLNRIASAILFPGPGDDGSVIRRIKVSVADNAPLLPEASRNFARDVLLWSRGGTPLRALFVITVGAIAFVALTGLLVFILFLLTATINAIVISLLISLVAAGGFLALFFALVTAIYIGALSIAIFAISVTTFWAFVAILIITGWTGFIYSVWVVTRKSFGFAKHSLGVTGSAISSYTAARHARYIIHTDSN 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01882 230 PANTHER VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL SUBUNIT 10 222 - -
Vimu6g01882 230 MobiDBLite consensus disorder prediction 1 20 - -
Vimu6g01882 230 SUPERFAMILY MFS general substrate transporter 96 208 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01882 Vimu-Chr6 17025319 17028840 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01882 - - pvu:PHAVU_001G228000g 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01882 6 17025319 17028840 Vimu1g01149 1 8800083 8802634 PCT