Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01881 ATGGTTGATACCACCAAAACGGTGCATTTCGGCATCTTAGGTTGCGCCGAAATCGCTCGGAAAGTGGCTCGAGCCATTGACCTCGCCCCCAACGCCACTCTCTGCGCCGTGGCGAGCCGTTCCAAGGAGAAGGCCGAGAAGTTCGCCGCCGAGAATGGGTTTCCGGCAAGCGTGAAGATTTACGGGAGCTATGATCGGCTGTTGGAGGATCCAGGCGTGGATGCCGTGTACGTGCCACTCCCCACAAGTCTGCACGTGCGGTGGGCGGTTTTGGCTGCCGGTAGAAAGAAACACGTGCTGGTGGAGAAGCCCGCGGCTCTTGACGTGGCGGAGCTTGACCAGATCCTGGCAGCGGTCGAATCTAACGGCGTGCAGTTCATGGATGGGAGCATGTGGTTGCATCACCCTAGAACTGCCCACATTCAACAGTTGTGCTTTGTTCCGAGCTCTGCTAAAAGCATTGGACCAATTCATTTTATCCACAGTACAGGAACATTGCCAGCAACACCTGAATTTCTAGCGAGTAATATCAGGGTAAAGCCGGAGTTGGATGGTCTTGGTGTACTTGGTGACTTGGCCTGGTACTGCATTGGTGCTTCCTTGTGGGCAAAGGGCTACCAATTACCAATCACTGTCACTGCTCTTCCTGATGTCAAAAGAAACAGTGCGGGAGTCATCTTGTCCATCACAGTTTCTTTGCTGTGGGACCAACCAATCCAAACACTAGCAACCATTCACTGCTCCTTTCTTTCTCACATCTCCATGGACCTGGTTATATGTGGTTCCGATGGCTCTGTGCATCTAAGGGACTTCACAATCCCGTACCAAGAGACCAGTGCCTCGTTTGATGTCACATTTGGAGCCAAATTTGTTGACCTTCACATTGGGTGGAATGTGAAACCAGAGGAGGTTCATGTGGTCAATGAGCTCCCACAAGAAGCTCTAATGGTGCAAGAGTTTTCTAGGCTTGTTGCAGGTATTAAAGATTGTGGGTCTCAACCGTCTACCAAATGGCCTGAAATCAGTAGAAAGACTCAACTGGTAGTTGATGCAGTAAATAAGTCACTAGAGCTTGGCTGTAAATCTGTTTCCTTGTAG 1098 0.5064 MVDTTKTVHFGILGCAEIARKVARAIDLAPNATLCAVASRSKEKAEKFAAENGFPASVKIYGSYDRLLEDPGVDAVYVPLPTSLHVRWAVLAAGRKKHVLVEKPAALDVAELDQILAAVESNGVQFMDGSMWLHHPRTAHIQQLCFVPSSAKSIGPIHFIHSTGTLPATPEFLASNIRVKPELDGLGVLGDLAWYCIGASLWAKGYQLPITVTALPDVKRNSAGVILSITVSLLWDQPIQTLATIHCSFLSHISMDLVICGSDGSVHLRDFTIPYQETSASFDVTFGAKFVDLHIGWNVKPEEVHVVNELPQEALMVQEFSRLVAGIKDCGSQPSTKWPEISRKTQLVVDAVNKSLELGCKSVSL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01881 365 Gene3D Dihydrodipicolinate Reductase; domain 2 135 365 - -
Vimu6g01881 365 Pfam Oxidoreductase family, NAD-binding Rossmann fold 9 127 IPR000683 GO:0000166
Vimu6g01881 365 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 135 325 - -
Vimu6g01881 365 Gene3D - 3 134 - -
Vimu6g01881 365 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 161 IPR036291 -
Vimu6g01881 365 PANTHER - 6 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01881 Vimu-Chr6 17023000 17024289 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01881 - - gmx:100785424 624.78