Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01879 ATGGGTGGTGGGAGTCCTCTTCTAGTTATTATTTTGTTCTCGTTCTTGCTAAGAAGTGAGTCATGGGGATGGTTTTCATCATCGAAGGAGACTCCTTCTAGTGACAAGACTTATTCCAATGGAGGCAATTTTAAAGGTTCTAGTGCCGAGTTCTCCATTGAGGCCTTCAACGACCAAAAGGGACTGAAGTTAATAGATAATGCTCAGAAGAAAATGATTAGCTCAAACTCTTGTTGGCAAAATGCATATCAACATCTTTTTGCAGGATGTTCTGAGATCTTGGCTGTTGATGAGAAGAGATCTAGATTAGCTTGGCACCTAAGTGATTGCTTTCAGAGGGATTCTGGAAGATCTCCTTTTCCCCACTGTGATCCCAAAGCTTCTATTGCTTCATGCTTGAGAACCTTAGATGACTTTGCCCATAAGGTTTACCTTGAATTCTACCTTGAAACCAACACCATTTGTTATCAGTTGCAGGCATATGCATTCAAACATGAAACTGAGAGACTTGTGACTGAATTAAAAAGTTCAGCCCAGTATGTCGAGGACAAGTTAGATAACATTGAAGAAAAAACAGAACATCTATTACAAGGCTCTAAACGGGTTCATGAGTCTCTTGATTTAATTGGTAGCCACACTCAACAAGTAGCTCAAACTGCTAGAAATCTGGAAGGTCATATAGATTCTGTATTAATTCATTCACAGAATGTTTTCGAGCAGACTACAAAAATTGCACTGTCACAATCACAGTTACAAGAAGGTCAGGAGGATATGAAGAGAAGTTTGGAGGATGGGGTAACAATGCTCAAAGAATCATATAATTATTTGGGAAAAGAAATTGAAAAGTTAAGGGATGAAGCCACTGAGATAGAGAAGGAGGTAATTAAAGTTGGAGATGCCATGTCATTGAGGATGAACACCCTGCAAAGCAAAGCTGAAGATATTGGGAATATGGCTGGGCTTTCCTTAGATAAGCAACAACAACTTTTAGATGGGCAATCCACAGCACTTGAGTCCCTAAACTCATTGATTGAGTTTCAATCTAAGGCACTGGAAGAAAGCAGGAAAACCCTACAATATTTTGCTGAATATGGGCATAGACAACATGAAGAGCTTGTTCGGCGTCAAGAACAGATTCAAGGATTTCATGATCATTTGATGGAAAATTCAAAGTCAATATTGTCTTCTCAGGAATCTTTTGAATTAAAGCAAGCTTCCATGTTTGTTGTTTTAGACCGGATTTTTGCTTTACAAAATGCCTTGTTACTTGAATCTAGAATGATCAAAGCTTTCTTCGTTTATTCCATATCAATATTTGTCATCTTCATGTTGACCAGTACGAAGCAAACATACAATATGAGACCGTTCCTATATATTGGTATGTACCGACTAGTGTTATTAGTTTATAAACCTCATTATATATTTTTGACTAAATATTATTGGTTGTTTTCAGAGCTTTTTGCAACTTTCTTTGTGGAATTAATCGTTATTCGTTTAACATGTGACAACACTGAGCTCCAAACCTGGATAATAAATGTGGCCAGATTATTATTCATGGTAGGCGCTTCGGTTCAAGTGCTACATGCCATTTGCACATACAAGGACTATGAAACTTTGAACCATCAAATGCTGTTAACTCTAATTCACAAGGTTAACACCATGCAAAAACAAAAGGAATTGTCATGGGACGTGGATACTGATTACGAGGACTGGTCTGAATGGGTAGATGCTGATTTACCAGATGATGTTAATTGCATTGATGATCCTGATTTCATACCTTCAGAAGTTGCAGAGAATTCAATCACACCTATGAAAAATTATAACCTACGCTCTCGCAATCTTTACCATTAA 1851 0.3766 MGGGSPLLVIILFSFLLRSESWGWFSSSKETPSSDKTYSNGGNFKGSSAEFSIEAFNDQKGLKLIDNAQKKMISSNSCWQNAYQHLFAGCSEILAVDEKRSRLAWHLSDCFQRDSGRSPFPHCDPKASIASCLRTLDDFAHKVYLEFYLETNTICYQLQAYAFKHETERLVTELKSSAQYVEDKLDNIEEKTEHLLQGSKRVHESLDLIGSHTQQVAQTARNLEGHIDSVLIHSQNVFEQTTKIALSQSQLQEGQEDMKRSLEDGVTMLKESYNYLGKEIEKLRDEATEIEKEVIKVGDAMSLRMNTLQSKAEDIGNMAGLSLDKQQQLLDGQSTALESLNSLIEFQSKALEESRKTLQYFAEYGHRQHEELVRRQEQIQGFHDHLMENSKSILSSQESFELKQASMFVVLDRIFALQNALLLESRMIKAFFVYSISIFVIFMLTSTKQTYNMRPFLYIGMYRLVLLVYKPHYIFLTKYYWLFSELFATFFVELIVIRLTCDNTELQTWIINVARLLFMVGASVQVLHAICTYKDYETLNHQMLLTLIHKVNTMQKQKELSWDVDTDYEDWSEWVDADLPDDVNCIDDPDFIPSEVAENSITPMKNYNLRSRNLYH 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01879 616 Coils Coil 273 300 - -
Vimu6g01879 616 Coils Coil 171 191 - -
Vimu6g01879 616 PANTHER PROTEIN GAMETE EXPRESSED 1 7 614 IPR040346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01879 Vimu-Chr6 17010869 17013035 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01879 - - gmx:100814301 967.222