Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01876 ATGGCGCTAATAGTTCTCTCTCTCTTCCTCCTCCTCTTCACCTTCCAACTTCCCTTCCGCTCCTCTGGACAATCGAGCTCCATGGAATCAGTTCCCGATCTTCAGCACACTATGTATGCTTCCATAGAAGGATATCCTTGCGTGCGCCTGTTGAATCTATCTGGAAACATCGGTTGTTCTAGTAAGTTCGCTCTCGCGTTCTCTGTACCGATGAATTTTCCTTGCTTTGTTGTTTCCGAATTGTTAGATCCTGGACGAGATAAGGTTGTGGCTCCTATTGTACGGTTCGGAAATGTTGACAAAATAGCTGAGCCGTCTGCTGTACTGGTGTCAGTGGAGGACTTTCCAACTCTCTTTACTAGAATATCAGATGACTCTAGATTTGCTAGTAAAGTCAGTGGTGTACTTGTGGAACCAAGTACTGATTTGCAGAATAAGATAAACGGATTTTCTCCGGATCAAAAGTTTCCACAAGGTCAATTTGCACCTTACCATAATACCGGCTATGAATGGAATCCAATTGGTTCTGGTGTTATGTGGAAATCCTACAATTTTCCAGTGTTTTTACTCACAGAAAGTGGGTCAAAGACTCTTCAAGAGTTTGTAACAAAGAATGAGGACAAAAAGAAAGCTTATACTTCTAATGTGGCTGAGTTTGATCTGGTGATGCAGACAGTGAAATCTGGGACACTTGATTCAGAGTCTTGTTTAAAAGAAGAAACTTGTCTTCCTTTAGGTGGATACAGTGTCTGGTCATCTCTTCCTCCGATCAACACTTCCTCCTTACAGCAGTCTAAGCCCATTTTAATGGCAGTGGCATCCATGGATTCTGCTTCATTTTTTCGGGACAAAAGCCTTGGGGCAGACTCCCCTATTTCTGGTTTAATTGCATTACTAGCGGCTGTTGATGCACTCTCTCATTTGGATGGTCTTGATGACCTTAGTAAACAGAAGTGCACTAGTTCACCAGTGACAGGAAACTTGCGGTGGCTATCATCTCAGCTTGTTTTTGCAGTTTTCACTGGAGAGGCATGGGGTTATCTTGGAAGTAGGAGATTTTTGGTAGAACTTGACTTGCACTCAGATGCTGTTCATGGCCTTAATCGTGGATTAATTGAAAAGGTCATTGAAATTGGTTCTGTTGGAAAGGGTCTCAGTGGAGGTGTTAACAACTTTTTTGCTCATACAGAAGGGGATTCTTCTGCCTCAAATCAGACAATGGCTGCCTTGAAACGTGCACAGGAGTCACTGTTATCTGAAAACATAAAGATAGCATCTGCAAGTTCTTCAAATCCTGGGATACCTCCATCATCTTTAATGTCCTTTTTGGAAAAGAATCCTGCAATCTCTGGTGTCGTTCTTGAAGATTTTGACTCTGTCTTTGTCAACAAGTTCTACCATAGTCACCTAGATGATTTATCAAATGTGAATTCATCAGCTGTTGTTGCTGCTGCTTCTCTTGTTGCCCGTACACTTTACATACTCGCTAGTAAAAATGAAGATGTTCATGATTCAACTTTGTCTACTATAAATGTTAATGTCTCACTTGTTGAACAACTTATGGGTTGCTTGTTGGACTGTGATCCTGGTCTTTCTTGTGAACTGGTGAAGAAATATATTTCTCCCATGTCAACCTGTCCAAGCCATTATGTTGGCGTTATCTTGGATGAACCTTCATCTACACCATATACAGGATACATCAATGATGTTCCCAGGTTCATTTGGAATTTTCTGGCTGATAGGACTTCTATCCCTAGGGAGACTAACAGCTCAGGTTGTCAACACGGTTGCAATGATAGAGATGAAGTGTGCATCAAAGCAGAGACCGATGGAAAGGGAGTTTGTGTTCTCTCTACAACAAGGTATGTTCCAGCATATTCAACACGGCTAAAATTTGAATCAGGAGTGTGGAATGTTTTGCCTCCTAATTCCTCTGAAAAAATGGGTGTTGTGGATCCTGTCTGGACTGAGAGCAACTGGAATTCAATAGGTATGCGAGTCTACACAGTCCAAAATGCTGCTTATGACCGGCTTGTTCTGTTTGGGGGCATCACTTTGACAATCATCTCATACCTTGCAATAGCAACTGCTAGAACCTTGTTTTCCAAAGCAATGAAGAGGGACTGA 2127 0.4203 MALIVLSLFLLLFTFQLPFRSSGQSSSMESVPDLQHTMYASIEGYPCVRLLNLSGNIGCSSKFALAFSVPMNFPCFVVSELLDPGRDKVVAPIVRFGNVDKIAEPSAVLVSVEDFPTLFTRISDDSRFASKVSGVLVEPSTDLQNKINGFSPDQKFPQGQFAPYHNTGYEWNPIGSGVMWKSYNFPVFLLTESGSKTLQEFVTKNEDKKKAYTSNVAEFDLVMQTVKSGTLDSESCLKEETCLPLGGYSVWSSLPPINTSSLQQSKPILMAVASMDSASFFRDKSLGADSPISGLIALLAAVDALSHLDGLDDLSKQKCTSSPVTGNLRWLSSQLVFAVFTGEAWGYLGSRRFLVELDLHSDAVHGLNRGLIEKVIEIGSVGKGLSGGVNNFFAHTEGDSSASNQTMAALKRAQESLLSENIKIASASSSNPGIPPSSLMSFLEKNPAISGVVLEDFDSVFVNKFYHSHLDDLSNVNSSAVVAAASLVARTLYILASKNEDVHDSTLSTINVNVSLVEQLMGCLLDCDPGLSCELVKKYISPMSTCPSHYVGVILDEPSSTPYTGYINDVPRFIWNFLADRTSIPRETNSSGCQHGCNDRDEVCIKAETDGKGVCVLSTTRYVPAYSTRLKFESGVWNVLPPNSSEKMGVVDPVWTESNWNSIGMRVYTVQNAAYDRLVLFGGITLTIISYLAIATARTLFSKAMKRD 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01876 708 Pfam Nicastrin small lobe 84 225 IPR041084 -
Vimu6g01876 708 PANTHER NICASTRIN 85 707 IPR008710 GO:0016020|GO:0016485
Vimu6g01876 708 CDD M28_Nicastrin 40 661 - -
Vimu6g01876 708 Gene3D Zn peptidases 195 513 - -
Vimu6g01876 708 Pfam Nicastrin 267 493 - -
Vimu6g01876 708 SUPERFAMILY Zn-dependent exopeptidases 239 493 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01876 K06171 - gmx:100818367 1153.66