Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01873 ATGGATGCTGAAAAAGTGGTGCACACTGGAGGTTGTCATTGTAAGAGTGTAAGGTGGAAAGTGGTTGCTCCTTCCAGTGTTGTGGCATGGGATTGCAACTGCTCAAACTGCAACATGAGAGCCAATACTCACTTCATTGTTCCTGCTGACGATTTTGAGCTTTTGGGAGATTCTGGGAAGTTTCTCACCACTTACACTTTTGGCGCTCAGACTGCAAAGCACACATTCTGTAAAATCTGTGGCATAACATCGTTCTATTATCCACGCTCAAATCCAGATGGGGTCGCAGTTACATTTAGATGTGTTGACCCTGGAACATTGGCCCATGTTGAAATCAGACATTTTGACGGGAAGAATTGGGACACCGCATATAATCAGACAGGTATATCTTCATATTCAAAGGTGGAGAAGTAA 414 0.4372 MDAEKVVHTGGCHCKSVRWKVVAPSSVVAWDCNCSNCNMRANTHFIVPADDFELLGDSGKFLTTYTFGAQTAKHTFCKICGITSFYYPRSNPDGVAVTFRCVDPGTLAHVEIRHFDGKNWDTAYNQTGISSYSKVEK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01873 137 Pfam Glutathione-dependent formaldehyde-activating enzyme 32 111 IPR006913 GO:0016846
Vimu6g01873 137 ProSiteProfiles CENP-V/GFA domain profile. 8 121 IPR006913 GO:0016846
Vimu6g01873 137 Gene3D - 9 124 - -
Vimu6g01873 137 SUPERFAMILY Mss4-like 5 130 IPR011057 -
Vimu6g01873 137 PANTHER CENTROMERE PROTEIN V 5 135 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01873 - - gmx:100782041 275.404