Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01863 ATGTCGGCTTCATGCGGGGTGGTGGAGTGCGTCTTCGTGCTGGGCTGCGCTAGGTGGCTCTGGAAGCGCTGCACCTACGTTGGAAACTACGACAGCGCCACGTGGCCGGCCGCCACCGCTGATGAGTTTGAACCGGTGCCGCGTGTCTGCCGCCTCATCCTCGCCAACTACGATCCCGATCTTCGAAATCCTCAGTACTACAAGCCCGCCCCCGGTCACCGCCTGAACCCGGACTGGGTCGAGAAGCGCGTGACCTACGAGCAAACTCTCGGACACGCGCCGCCCTACCTCATCTACCTCGACCACGAGCACAAGGAGATCGTGCTGGCGGTGCGTGGCCTCAACCTGGTCAATGAGAGTGACTACAAAGTCCTACTTGATAACCGGTTGGGGCAGCAGATGTTCGACGGCGGGTACGTACACCGTGGGCTGCTGAAGTCGGCGCAGTGGCTGCTGAATAGGGAGTCGGAGACGCTGAAGCGATTGTGGTTGGAAAACGGTTCCGAATATGATATGGTGTTCACGGGACACTCTTTGGGTTCTGGGGTGGTGTCGTTGTTGACGATTTTGGTTGTGAACCATAGGGACGGTTTGGGTGGGATTCCTAAGGAGAAGATTCGATGTTATGCGGTTGCTCCTGCCAGGTGTATGTCCCTCAATCTGGCTGTCAAGTATGCCAATGTCATTCATTCTGTTGTTTTGCAGGATGATTTCTTGCCAAGAACGCCCACTCCGTTGGAAGATATATTCAAATCTATATTCTGGTTAGTACATCCCCTTTGTAGCCTTGATGATTTAAACAGTTTGCCCTGCTTATTGTTGTTGGTTTGCCTGAGAGACACTTTCATACCTGAGGGTAGAAAGCTTAGAGATCCAAGGAGACTTTATGCGCCTGGACGAATGTACCATATTGTTGAGAGAAAGTTTTGCAGATGTGGGAGATTTCCTCCTGAAGTGAGGACTGCTATTCCTGTTGATGGAAGATTTGAGCATATCGTCTTGTCGTGTAATGCAACATCAGATCATGGAATTATTTGGATCGAAAGGGAGGCCGAGAAAGCCTTGCAAGGGAAGAGCTCTGAAACTGTGACAGAGCCTCCAACGGTACAAAAGTTTGAGAGGTTGAAGACCATAGAGAAAGAACATAGAGATGCTTTGGAAAGGGCTGTTAGCTTAAACGTGCCTCATGCAGTGGACTCTGCAGAGGAAGAAACGGCAGAGAAGAATGAAGGTGAAGAAGCATCAGATAGTGGAAACAATAACGTGTCAAGTAGCCAATCAAAATCCAGTGATGGAAGGTCAAACTGGGATGAGGTTGTGGAAAAACTCCTAAAGAAGAGTAAGACAGTAGAACTAAATCAGGAAAGGGATACCAATGTCTTACCATAA 1389 0.5004 MSASCGVVECVFVLGCARWLWKRCTYVGNYDSATWPAATADEFEPVPRVCRLILANYDPDLRNPQYYKPAPGHRLNPDWVEKRVTYEQTLGHAPPYLIYLDHEHKEIVLAVRGLNLVNESDYKVLLDNRLGQQMFDGGYVHRGLLKSAQWLLNRESETLKRLWLENGSEYDMVFTGHSLGSGVVSLLTILVVNHRDGLGGIPKEKIRCYAVAPARCMSLNLAVKYANVIHSVVLQDDFLPRTPTPLEDIFKSIFWLVHPLCSLDDLNSLPCLLLLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATSDHGIIWIEREAEKALQGKSSETVTEPPTVQKFERLKTIEKEHRDALERAVSLNVPHAVDSAEEETAEKNEGEEASDSGNNNVSSSQSKSSDGRSNWDEVVEKLLKKSKTVELNQERDTNVLP 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01863 462 Pfam Lipase 3 N-terminal region 8 67 IPR005592 GO:0016042
Vimu6g01863 462 Pfam Lipase (class 3) 108 244 IPR002921 GO:0006629
Vimu6g01863 462 CDD Lipase_3 94 244 - -
Vimu6g01863 462 Gene3D alpha/beta hydrolase 37 261 IPR029058 -
Vimu6g01863 462 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 456 - -
Vimu6g01863 462 MobiDBLite consensus disorder prediction 415 433 - -
Vimu6g01863 462 MobiDBLite consensus disorder prediction 388 436 - -
Vimu6g01863 462 SUPERFAMILY alpha/beta-Hydrolases 38 246 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01863 Vimu-Chr6 16819390 16822296 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01863 1 356 Miscellaneous Gene Families AT5G37710 71.910 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01863 - - gmx:100798831 773.467