Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01844 ATGGCTTCTCCAACACTGAGTTTGAGGCCTCAAAAGTCTACAATAGTGCTCTTTCTTATCTGCATTTCATTTTCATATTCAGTTGAAGAAGTCATAACATCATCTAAGAATTTAGACCAACCACTGTTTCCCCCACCAGCAGAGACTGAAATCAAGTGTGGATCATGTCCTTGTGGAGACACCTGTGGTGAGCAACTTCCACCACCCCCACCATCAACTCCACCTCCGTGTCTATCTCCACCGCCACCACTACCATCGCCACCACCTCCACCACCACCGTCGCCACCGCCTCCTCCTAAGTATCCCACATGTCCTCAGAACTGCAACCCCTTGCCGCCGCCACCGCCGCCAAGATTCGTATACGTGCCTGTGCCAGGTGTTCCAAAACCATACACTTGGGTATATTACTACTCTGGTGCTGAAAACAGAGCTGTGGGATTGCTTGTTTTGGCTGGTTTGGGAGGAATATCATTGGCAACGCTACTTTTGGATGACATCATGAAGCTAAATCTATACTTCTGA 522 0.4866 MASPTLSLRPQKSTIVLFLICISFSYSVEEVITSSKNLDQPLFPPPAETEIKCGSCPCGDTCGEQLPPPPPSTPPPCLSPPPPLPSPPPPPPPSPPPPPKYPTCPQNCNPLPPPPPPRFVYVPVPGVPKPYTWVYYYSGAENRAVGLLVLAGLGGISLATLLLDDIMKLNLYF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01844 173 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 2 88 - -
Vimu6g01844 173 MobiDBLite consensus disorder prediction 64 104 - -
Vimu6g01844 173 PRINTS Proline rich extensin signature 113 130 - -
Vimu6g01844 173 PRINTS Proline rich extensin signature 92 108 - -
Vimu6g01844 173 PRINTS Proline rich extensin signature 71 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01844 Vimu-Chr6 16650112 16651472 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01844 - - gmx:102666273 194.512