Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01839 ATGGGTGATGAAGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGGTTGTTCCTGTGGCTTCAATGTTGACTCCCAACCAGTTTGAGGCAGAACTACTGACAGTACTCAAATTTCCTACTCATAGGATTCAGTCTGAAGGACAAGGTCGGGAGGCCTGTAGGCTTCTCCATGCGGCTGGGCCTTCAAAGGTTATAATTACAAGTATAAATATTGACGGGAATCTTCTTCTCATTGGCAGTCATCAAAAAGAAAAGGGAACAGGAGATCTGATGACTGCACTTCTTCTTGGTTGGAGCAATAAATACAGAGACAACCTTGAGATTGCTGCAGAACTTGCAGTGTCAAGCTTGCAGGCACTTTTACACAGGACGCTCAGTGACTACAAAAACGCTGGACATGATTCCCAGTCAACCAGTTTAGAGATCAGATTAATTCAAAGCCAGGATGATATTCGCAACCCACAAGTCAACTTTAAAGCAGAAATATACAGCTAA 510 0.4294 MGDEGKLYVPQELVSVYREKVVPVASMLTPNQFEAELLTVLKFPTHRIQSEGQGREACRLLHAAGPSKVIITSINIDGNLLLIGSHQKEKGTGDLMTALLLGWSNKYRDNLEIAAELAVSSLQALLHRTLSDYKNAGHDSQSTSLEIRLIQSQDDIRNPQVNFKAEIYS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01839 169 Gene3D - 1 168 IPR029056 -
Vimu6g01839 169 Pfam Phosphomethylpyrimidine kinase 4 77 IPR013749 -
Vimu6g01839 169 SUPERFAMILY Ribokinase-like 1 166 IPR029056 -
Vimu6g01839 169 PANTHER PYRIDOXAL KINASE 1 166 IPR004625 GO:0008478|GO:0009443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01839 K00868 - gmx:100811288 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01839 6 16619302 16624665 Vimu6g01839 6 16619302 16624665 ECH