Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01823 ATGGAGGAACTAAACTCGTGTTTCTTCAACCCTGCAATTTTGGATTCCCTATCTGAGGATTCTCTTCACGAAATCATCGGCAGCTACAATGGCTTCTGCGACGCGACGCAATCCCTTCTCACCGGGAGCGGCGATCTCTCCGTCGGTCCCGACTTCGTTTCTCACGTTCACACCCTCTGCAAACACCGTCTCCATTCCCTCGTTCAAGACCACTTTCTTCGAGTCCTCGAGGAGACTTTTGAACGAAATGGGGCATCAAGATTTTGGCGCCATTTTGATCCCTACTCTCATGTTGCGGGTTTGAACAAGAATGATGATCTTGATATTGACGAGGATGAAATTCAGAGTGTGTTGTATAATGCTTTGGAAGAGGTTACTTTGGAGAAACAGTATCAGGAGAAGTGTCTTTTGATGTTGGTGCATGGTTTGCAATCTTTCCAGGACCAGATGTTAGAGGATAAACATGATTTTGAAGGAGAAAGAAGTTACCTTACCTCTAAGTATCAATGGATTGTCTCTTCTGTTCTGATGGCCACACTTCCTCGACATTTCCCTGTTATACTGCATTGGTATTTTAAAAGAAAACTGGAGGAGTTAAGTACGATCATGGATGAAGAGTTTTGTGATGGTGCATCTCAAAATAAGGATGGCATGGATTTAGATGAAAAAGGAAAAGTATGCAACAAGGTTGGTGAAATGGATGTTGATGAGTGCTATAACGACCATAGGTTCTCGGAAAACAGTAGACTGGTGAAGAACATTGGAAAGGTTGTTCTTGATCTTAGAAATCTTGGATTTACTTCCATGGCGGAGGATGCTTATGCTTCTGCTATATTTTTACTACTGAAGGCAAAAGTAAATGATGTAGCTGGTGATGATTATCGGAGTTCCGTTTTACAATCTATTAAAAGCTGGATACAGGCTGTTCCTCTCCAATTTCTGCACGCACTTCTTGTCTATCTTGGTGATGTAGTTAGTTATGAGAGTACTTCATCAGGTTTGAAATCACCTTTGGCACCACAACCATCTTCATGCTGTCCTGGAATTAATACTCCCTCTGAAGGGCTAGTGAGATGGAAGTTGCGGCTGGAATATTTTGCATATGAAACACTGCAAGATTTAAGAATAGCTAAATTATTTGAGATAATTGTTGATTATCCTGAGAGCTCTCCTGCAATTGAAGACTTAAAATTGTGTCTTGAATACACTGGACAACATTCAAAGCTGGTGGAATCGTTTATTTCAGCACTGCGATATCGCTTGCTTACTGCAGGTGCATCAACCAATGATATATTACACCAATATGTTTCAACAATTAAAGCACTTAGGACAATAGATCCTGCAGGTGTTTTCCTTGAGGCAGTTGGTGAACCCATAAGGGATTATTTAAGAGGAAGGAGGGATACCATAAAGTGCATAGTAACAATGCTGACAGATGGAACTGGTGGAAATTCAAGTTCCTCTGCGAATACTGGAGATAGCCTTCTTGAAGAGTTGAACAGAGACGAAGAAATTCAAGAGAATGCTGGTGTTGATGATGATTTCAACAGTGATGATAGGCAAGCATGGATCAATGCCATGCGCAGATGGCAACCTGACCCTGTGGAAGCAGATCCATTAAAGGGAAGCAGAAACCAAAGGAAGGTTGACATACTTGGGATGATTGTTGGCATAATTGGTTCAAAAGATCAATTAGTTCATGAATATCGAACTATGCTTGCTGAGAAACTTCTAAATAAATCAGATTATGATATTGATTCTGAGATACGTACTCTAGAACTCCTGAAGATACACTTTGGAGAGAGCAGCCTACAGAAATGTGAGATTATGCTCAATGATCTAATTGGCTCAAAGCGAACCAACAGTAACATTAAAGCTACCATAAATCAGCTACCTCAGACAAGTGTTGAAGTGGGAGACAGTGCAATATCCATGGATGTAATTTCTGCCACTATCATATCTTCTAATTTCTGGCCTCCAATACAGGATGAACCACTTAACCTACCTGAACCTGTTGACAACCTCCTATCTGATTATGCAAAGAGATTTAGTGAAATAAAAACTCCTCGTAAGCTTCAGTGGAAAAAAAGTCTTGGAACCATCAAGCTGGAGGTGCAGTTTCAAGATAGGGAAATGCAATTCACAGTAGCCCCTGTTCACGCATCTATCATTATGAAATTTCAAGAACAACCAAGTTGGACTGCTAAAAACCTTGCAGCTGCTATTGGGATACCTGCAGATTCTTTAAATCGGAGAATAAATTTCTGGATAAGCAAGGGGATCATTACAGAGTCGCAAGGGGAAGATTCCTCTGACCATGTATACACCATTGTGGAAAACATGGCTGAGACAAGTAAGAATGGAGCCAGTGCTGGCACTCAGGATCTTCTAGGAGGTGACGAGGAGGAGGACAGATCTGTGGCCTCTGTAGAAAATCAACTTCTTAAGGAAATGACTGTATATGAGAAATTTATCATGGGGATGCTCACAAACTTTGGTAGCATGGCATTAGATCGAATTCACAATACTCTCAAGATGTTTTGCATTGCTGATCCCCCATATGACAAATCACTCCAGCAACTACAAAGCTTTTTATCTGGTCTGGTCTCTGAGGAGAAGTTAGAACTTCGGGATGGAATGTACTTTCTAAAGAAGTAG 2658 0.4105 MEELNSCFFNPAILDSLSEDSLHEIIGSYNGFCDATQSLLTGSGDLSVGPDFVSHVHTLCKHRLHSLVQDHFLRVLEETFERNGASRFWRHFDPYSHVAGLNKNDDLDIDEDEIQSVLYNALEEVTLEKQYQEKCLLMLVHGLQSFQDQMLEDKHDFEGERSYLTSKYQWIVSSVLMATLPRHFPVILHWYFKRKLEELSTIMDEEFCDGASQNKDGMDLDEKGKVCNKVGEMDVDECYNDHRFSENSRLVKNIGKVVLDLRNLGFTSMAEDAYASAIFLLLKAKVNDVAGDDYRSSVLQSIKSWIQAVPLQFLHALLVYLGDVVSYESTSSGLKSPLAPQPSSCCPGINTPSEGLVRWKLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKLCLEYTGQHSKLVESFISALRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRRDTIKCIVTMLTDGTGGNSSSSANTGDSLLEELNRDEEIQENAGVDDDFNSDDRQAWINAMRRWQPDPVEADPLKGSRNQRKVDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLIGSKRTNSNIKATINQLPQTSVEVGDSAISMDVISATIISSNFWPPIQDEPLNLPEPVDNLLSDYAKRFSEIKTPRKLQWKKSLGTIKLEVQFQDREMQFTVAPVHASIIMKFQEQPSWTAKNLAAAIGIPADSLNRRINFWISKGIITESQGEDSSDHVYTIVENMAETSKNGASAGTQDLLGGDEEEDRSVASVENQLLKEMTVYEKFIMGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYFLKK 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01823 885 Pfam Cullin family 548 756 IPR001373 GO:0006511|GO:0031625
Vimu6g01823 885 SUPERFAMILY Cullin homology domain 529 780 IPR036317 -
Vimu6g01823 885 FunFam Anaphase-promoting complex subunit 2 517 631 - -
Vimu6g01823 885 FunFam Anaphase-promoting complex subunit 2 800 885 - -
Vimu6g01823 885 SUPERFAMILY "Winged helix" DNA-binding domain 814 884 IPR036390 -
Vimu6g01823 885 Gene3D Cullin; Chain C, Domain 2 645 787 - -
Vimu6g01823 885 SMART APC2_2 824 883 IPR014786 -
Vimu6g01823 885 SMART cul_2 550 707 IPR016158 -
Vimu6g01823 885 ProSiteProfiles Cullin family profile. 554 757 IPR016158 -
Vimu6g01823 885 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 24 884 IPR044554 -
Vimu6g01823 885 Gene3D - 800 885 IPR036388 -
Vimu6g01823 885 Gene3D Cullin Repeats 521 630 - -
Vimu6g01823 885 FunFam Anaphase-promoting complex subunit 2 647 791 - -
Vimu6g01823 885 Pfam Anaphase promoting complex (APC) subunit 2 824 881 IPR014786 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01823 K03349 - gmx:100785428 1606.27