Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01818 ATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCCGGAGAGCCAGCAAAATTGATCAGGCAGAGATACCGTGAAGCTGCAGATTTGATCGCCAAGGGAAAGATGTGTGCTCTGTTCATCAACGATCTTGATGCAGGAGCAGGTCGTCTTGGTGGAACCACCCAATACACTGTGAACAACCAGATGGTGAATGCCACTCTCATGAACATTGCTGATAACCCTACAAATGTGCAGCTTCCTGGTATGTACAACAAGGAAGAGAACGCCCGTGTGCCCATCATTGTCACTGGTAACGATTTCTCAACATTGTATGCTCCTCTCATTCGTGATGGGCGTATGGAGAAGTTCTACTGGGCACCAACAAGGGATGACCGCGTTGGTGTTTGCAAGGGAATTTTCCGCACCGATGGTATTGCTGACGAGGACATTACAAAGCTTGTTGACACCTTCCCAGGCCAATCTATTGGTAAGAACTAA 477 0.478 MMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGIADEDITKLVDTFPGQSIGKN 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01818 158 Gene3D - 1 118 IPR027417 -
Vimu6g01818 158 Pfam ATPase family associated with various cellular activities (AAA) 2 117 IPR003959 GO:0005524|GO:0016887
Vimu6g01818 158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 143 IPR027417 -
Vimu6g01818 158 Gene3D - 119 156 - -
Vimu6g01818 158 PANTHER - 1 156 IPR044960 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01818 Vimu-Chr6 16426628 16427104 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01818 - - smil:131019519 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01818 6 16426628 16427104 Vimu6g01818 6 16426628 16427104 ECH