Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01816 ATGGCTGCTGTCACGGAATTCGGGGTATCTCAATTCCTGCAGGGTACTTCGAGGCAGACACTGTTTTTGAAGAAGCAGCCTCAGAAACATAGAAGTCACATGCTTTGGGGTACGCTTTGGAATAGGAATTGGGCTCTGGGATCAACTCGAAGAGCTTTGCCTTTAAGTTGTCAGGCTCATGAAAATCCCAGAGCAGTGGTTTCTGGTGGTGTGAACAGTTCTGTAGAAGAGCAACCTGGTTTAGTTGAGAAGCCTGCCTCGGAAGTTGTTCATTTATTCCGAGTCCCGTTTATGCAAAAAAGTGCAGCTGCTGAGCTTTTAAAGGATACTCAAGTGAAGATCTCTGATCAGATCGTGGAAATACAAACCGAGCAATGTTACAATGTTGGCCTTAGTTCACAACTTTCGAGTGAAAAATTTTCTGTCCTTAAATGGCTTCTTCAAGAAACATTTGAGCCCGAGAATCTGGGAAATGAGAGCTTTCTTGAGAAGAAGAGGAAGGAGGGGTTGAGTTCAGTTATAGTCGAGGTTGGTCCCAGGTTGTCATTTACCACAGCGTGGTCTACTAATGCTGTGGCAATTTGCCATGCTTGTGGATTGACAGAAGTGACCCGTTTGGAACGGTCAAGGAGGTACTTGTTGTTCACCACTAGTGAATTGCAAGGTCATCAAATAAATGAATTTGCATTTATGGTGCATGATAGAATGACTGAATATGTTTATAGGCAAAAACTAACATCCTTTGAGACCAGTATTGTTCCTGAGGAGATTCGTTATATACCTGTTATGGAGAGGGGACAAAAGGCATTAGAAGAGATTAATCTAGAGATGGGTTTCGCTTTTGATGACCATGATTTAGAATACTACACCAAACTTTTCAGAGAAGACATTAAGCGGAATCCAACAAATGTGGAGTTGTTTGATATTGCGCAATCCAACAGTGAGCATAGCAGACATTGGTTTTTTACTGGAAAGATTTTCATTGATGGACAACTTATGAATAAGACTCTAATGCAAATTGTGAAAAGTACTCTGCAGGCAAATCCAAATAACTCTGTTATTGGGTTTAAAGATAACTCAAGTGCAATTAGGGGTTTCCCAGTAAAGCAGCTCCGACCAGTTCAGCCTGGCTCATCATGCCCGTTGGAAATTGCAGTACATGATTTAGATATCTTATTTACAGCTGAAACGCATAATTTTCCATGTGCAGTGGCACCTTATCCTGGTGCAGAGACGGGCGCAGGAGGTCGAATTAGAGATACACATGCTACTGGAAGGGGTTCCTTTGTCCAGGCAGCTACAGCTGGTTACTGTGTTGGGAATCTCAACAGGTCAAGCTTTTATGCTCCATGGGAAGACCCCTCCTTTACTTATCCATCAAATTTGGCACCACCTTTACAGATTCTTATAGATTCTAGTAATGGTGCGTCTGATTATGGGAACAAATTTGGAGAGCCATTGATCCAGGGTTTCTGTAGAACTTTTGGAATGAGACTTCCTAGTGGGGAGAGACGAGAATGGTTGAAGCCAATAATGTTCAGTGCAGGTATTGGACAGATAGACCACCTTCATATAACAAAGGGAGAACCTGACATTGGGATGCTGGTTGTCAAGATTGGAGGCCCTGCTTATCGCATTGGTATGGGAGGTGGGGCGGCCTCTAGCATGGTAAGTGGGCAGAATGATGCAGAGCTTGATTTCAATGCTGTGCAACGTGGGGATGCTGAAATGGCTCAAAAACTATATCGCCTTGTTCGGGCCTGTATTGAGATGGGGGATAAAAACCCAATAATCAGCATTCATGATCAGGGTGCTGGTGGGAATTGCAATGTTGTAAAGGAAATTATATATCCAGAGGGTGCAGAGATAGATGTCCGTGCAATTGTGGTTGGTGATCATACAATGTCTGTTCTAGAAATTTGGGGGGCAGAGTATCAGGAACAGGATGCAATCTTGGTGAAGCCTGAAAGTCGTGATCTCTTGGAGTCAATCTGTAGCAGGGAAAAAGTTTCAATGGCTGTTATTGGAACTATTAGTGGTGACGGACGTGTTGTGTTAGTTGATAGCCTAGCAACCCAACAGTGTATTTCAAATGGACTTCCTCCACCCCCACCCGCAGTTGATCTTGAGTTAGAGAAAGTCCTTGGTGACATGCCTAAAAAATCTTTTCACTTTAGTCGGGTGGTCTATGAGCGGGAGCCACTTGATATTGCTCCTGCTATTACAGTGATAGATTCTTTGAAGAGGGTGTTGAGTTTACCATCTGTCTGTTCAAAGCGTTTCTTAACAACAAAAGTTGATAGGTGTGTTACTGGTCTAGTTGCACAACAACAAACTGTTGGTCCTTTGCAAATTCCACTTGCTGATGTTGCCGTTACAGCTCAAACTTTTACTGATTTGACTGGAGGTGCTTGTGCCATTGGTGAACAACCAATCAAAGGCTTGTTAGACCCCAAAGCAATGGCTAGGTTGGCTGTTGGAGAAGCACTAACAAATCTTGTATGGGCAAAGGTCACTTCCCTTTCTGATGTCAAGGCTAGTGGTAATTGGATGTATGCTGCCAAGCTTGGTGGGGAAGGAGCTGACATGTATGATGCTGCCATATCTTTATCTGAAGCAATGATTGCACTTGGCATTGCTATTGATGGAGGGAAAGACAGCCTTTCTATGGCAGCCCATTCTGATGGAGAAGTTGTCAAGGCTCCTGGAAATCTTGTTATAAGTGTTTATGCTACTTGTCCTGATATAACAAAAACAGTGACTCCAGACTTAAAACTTAAGGACGAAGGTGTTTTGCTTCATATTGATTTGTCAAAAGGTAAGAGACGGTTAGGTGGATCTGCTCTTGCTCAGGCATTTGATCAAGTTGGGGATGAGTGTCCTGATCTTGATGACGTTCCTTACCTTAAAAAGGTCTTTGAAGGTGTTCAAGATCTTCTTACTGATGAACTGATATCTGCTGGCCATGACATCAGCGATGGTGGGCTGCTTGTTTGTGCCTTAGAGATGGCATTCGCTGGTAATTGCGGATTTAATTTGAACTTGACATCTCAAGGTAACAGCCTCTTCCAAACACTCTATGCTGAAGAGCTTGGGTTAGTTCTTGAAGTAAGCAAGAAAAATCTGACTTTGGTGATGGAAAAGTTGGGCCATGTGGGAGTTTCAGCGGAAGTCATTGGTCAAGTAACAGCCAGTCCATCCATAGAAGTTAAGGTTGATGGGGAGATTTTCTTAACAGAAAAAACTAGCATCCTTAGGGACATGTGGGAAGAGACTAGTTTTCAGCTGGAGAAGTTCCAAAGACTGGCATCTTGTGTGGATATGGAGAAAGAAGGACTACAACATCGATATGAACCCTCATGGGATCTAACCTATTCTCCTGTCTTCACTGAGGAAAAGTTTTTGTCTGCAACTGTGAAACCTAAAGTGGCTGTGATTAGAGAAGAGGGGAGCAATGGAGATAGAGAAATGGCTGCAGCTTTTTATGCTGCTGGTTTTGAGCCATGGGATGTTACTATGTCAGACCTTCTCAATAGAAAGATCTCTTTGCAAGAGTTTCGTGGAATTGTGTTCGTTGGTGGATTTAGCTATGCTGATGTGCTTGATTCTGCAAAAGGTTGGTCTGCTTGCATAAGATTCAATGAGCATGTTTTGCAACAATTTCAGGAGTTTTACAAGCGACCGGACACTTTTAGTCTAGGTGTATGCAACGGGTGTCAGCTAATGGCTTTGTTGGGTTGGATACCTGGTCCACTAATTGGGGGTGTGCATGGTGCTGGTGGTGACCTATCACAACCAAGGTTCATCCATAACGCGTCTGGGCGGTTTGAATGTCGCTTTACAAGCGTTACTGTACTGCCATCACCAGCTATGATGTTCAAGGGCATGGCAGGTAGCACAATGGGTATATGGGCTGCTCATGGTGAGGGAAAGGCATATTTTCCTGACGAAGGTGTATTTGACCGGATAGTTCATTCTGAGTTGGCTCCTATCAGATATTGTGATGATGCTGGGAATCCTACTGAGGCATACCCTTTCAATGTGAATGGCTCTCCTTTAGGGGTAGCAGCTATTTGTTCCCCAGATGGGAGGCATCTCGCCATGATGCCTCATCCAGAGCGATGCTTCTTAATGTGGCAGTTCCCATGGTATCCAAAGCACTGGCATGTGGAGAAGAATGGGCCTAGTCCTTGGTTGCGCATGTTCCAGAATGCAAGAGAGTGGTGTTCTTGA 4233 0.4385 MAAVTEFGVSQFLQGTSRQTLFLKKQPQKHRSHMLWGTLWNRNWALGSTRRALPLSCQAHENPRAVVSGGVNSSVEEQPGLVEKPASEVVHLFRVPFMQKSAAAELLKDTQVKISDQIVEIQTEQCYNVGLSSQLSSEKFSVLKWLLQETFEPENLGNESFLEKKRKEGLSSVIVEVGPRLSFTTAWSTNAVAICHACGLTEVTRLERSRRYLLFTTSELQGHQINEFAFMVHDRMTEYVYRQKLTSFETSIVPEEIRYIPVMERGQKALEEINLEMGFAFDDHDLEYYTKLFREDIKRNPTNVELFDIAQSNSEHSRHWFFTGKIFIDGQLMNKTLMQIVKSTLQANPNNSVIGFKDNSSAIRGFPVKQLRPVQPGSSCPLEIAVHDLDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVQAATAGYCVGNLNRSSFYAPWEDPSFTYPSNLAPPLQILIDSSNGASDYGNKFGEPLIQGFCRTFGMRLPSGERREWLKPIMFSAGIGQIDHLHITKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRLVRACIEMGDKNPIISIHDQGAGGNCNVVKEIIYPEGAEIDVRAIVVGDHTMSVLEIWGAEYQEQDAILVKPESRDLLESICSREKVSMAVIGTISGDGRVVLVDSLATQQCISNGLPPPPPAVDLELEKVLGDMPKKSFHFSRVVYEREPLDIAPAITVIDSLKRVLSLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVTAQTFTDLTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTSLSDVKASGNWMYAAKLGGEGADMYDAAISLSEAMIALGIAIDGGKDSLSMAAHSDGEVVKAPGNLVISVYATCPDITKTVTPDLKLKDEGVLLHIDLSKGKRRLGGSALAQAFDQVGDECPDLDDVPYLKKVFEGVQDLLTDELISAGHDISDGGLLVCALEMAFAGNCGFNLNLTSQGNSLFQTLYAEELGLVLEVSKKNLTLVMEKLGHVGVSAEVIGQVTASPSIEVKVDGEIFLTEKTSILRDMWEETSFQLEKFQRLASCVDMEKEGLQHRYEPSWDLTYSPVFTEEKFLSATVKPKVAVIREEGSNGDREMAAAFYAAGFEPWDVTMSDLLNRKISLQEFRGIVFVGGFSYADVLDSAKGWSACIRFNEHVLQQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPLIGGVHGAGGDLSQPRFIHNASGRFECRFTSVTVLPSPAMMFKGMAGSTMGIWAAHGEGKAYFPDEGVFDRIVHSELAPIRYCDDAGNPTEAYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYPKHWHVEKNGPSPWLRMFQNAREWCS 1410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01816 1410 Pfam CobB/CobQ-like glutamine amidotransferase domain 1140 1409 - -
Vimu6g01816 1410 FunFam Phosphoribosylformylglycinamidine synthase, putative 520 698 - -
Vimu6g01816 1410 Gene3D - 1086 1410 IPR029062 -
Vimu6g01816 1410 NCBIfam phosphoribosylformylglycinamidine synthase 93 1408 IPR010073 GO:0004642|GO:0006189
Vimu6g01816 1410 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1142 1386 - -
Vimu6g01816 1410 FunFam Probable phosphoribosylformylglycinamidine synthase 314 519 - -
Vimu6g01816 1410 SUPERFAMILY PurM C-terminal domain-like 530 764 IPR036676 -
Vimu6g01816 1410 SUPERFAMILY Class I glutamine amidotransferase-like 1138 1409 IPR029062 -
Vimu6g01816 1410 Gene3D - 520 695 IPR036676 -
Vimu6g01816 1410 FunFam Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial 919 1085 - -
Vimu6g01816 1410 SUPERFAMILY PurM N-terminal domain-like 321 528 IPR036921 -
Vimu6g01816 1410 Gene3D Phosphoribosylformylglycinamidine synthase, linker domain 253 313 - -
Vimu6g01816 1410 FunFam Putative phosphoribosylformylglycinamidine synthase 253 313 - -
Vimu6g01816 1410 FunFam Phosphoribosylformylglycinamidine synthase, putative 1085 1410 - -
Vimu6g01816 1410 CDD PurL_repeat1 305 688 - -
Vimu6g01816 1410 Gene3D - 728 913 IPR036921 -
Vimu6g01816 1410 SMART GATase_5_2 1140 1409 - -
Vimu6g01816 1410 Pfam Formylglycinamide ribonucleotide amidotransferase N-terminal 125 244 IPR040707 -
Vimu6g01816 1410 SUPERFAMILY FGAM synthase PurL, linker domain 253 320 - -
Vimu6g01816 1410 CDD PurL_repeat2 789 1062 - -
Vimu6g01816 1410 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 88 1410 - -
Vimu6g01816 1410 Pfam Formylglycinamide ribonucleotide amidotransferase linker domain 270 319 IPR041609 -
Vimu6g01816 1410 Pfam AIR synthase related protein, C-terminal domain 533 686 IPR010918 -
Vimu6g01816 1410 Pfam AIR synthase related protein, C-terminal domain 942 1072 IPR010918 -
Vimu6g01816 1410 Hamap Phosphoribosylformylglycinamidine synthase [purL]. 89 1410 IPR010073 GO:0004642|GO:0006189
Vimu6g01816 1410 SUPERFAMILY PurM C-terminal domain-like 928 1120 IPR036676 -
Vimu6g01816 1410 SUPERFAMILY PurM N-terminal domain-like 740 921 IPR036921 -
Vimu6g01816 1410 CDD GATase1_FGAR_AT 1143 1406 - -
Vimu6g01816 1410 FunFam Phosphoribosylformylglycinamidine synthase, putative 729 913 - -
Vimu6g01816 1410 Gene3D - 314 519 IPR036921 -
Vimu6g01816 1410 Gene3D - 914 1085 IPR036676 -
Vimu6g01816 1410 SUPERFAMILY PurS-like 91 248 IPR036604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01816 Vimu-Chr6 16412963 16417571 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01816 K01952 - gmx:100794589 2605.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01816 6 16412963 16417571 Vimu6g01816 6 16412963 16417571 ECH