Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01812 ATGGCGAACCCAGAGGGTAGTAGCAGAGCTTCAAGATGGTCACTTAAGGGAACCACTGCTCTCGTCACTGGAGGCACACGTGGAATCGGGCATGCTGTGGTGGAGGAACTGGCGGAGTTTGGTGCCACGGTGTACACTTGTTCCAGGAATGAAGAGGAGCTGAATGCACGCTTGAAGGAATGGAAAGAGAAAGGGTTTTTGGTTTCTGGGTCGGTTTGTGATGTGACTTCTCCAGCCCAAAGAGAGAACCTCGTTAAACAAGTGGACTCTGCCTTCAACGGAAAGCTCAACATACTTGAACTGGTGGATGAAGATCAAATGGTTCACATTTCAGAGAAATATCTTAAAATTGGATTTGGCCAGACGAAATTTGAGTTGTTCCATCATCCACCGATTCTGATTAACCAAATTAGTGAATACAGGAAATCCCTTGCTATAGTAAACAATGTGGGAACAACTGTGAGGAAACCAACAATAGAGTATACTACTGAAGATTATTCAAAATTGATGGCAATTAACTTGGACTCTGCATACCATCTCAGCCAACTTGCATATCCTCTTCTTAAAGCATCTGGAAATGGAAGTATTGTGTTCATTTCCTCTGTTGCAGGTCAGACAAGCGTAGCTTCTGGAGCCATTTATGCAGCAAATAAAGCTGCAATTGATCAGCTTTCTAGATATCTTGCTTGTGAATGGGCGAAAGACAACATAAGGAGCAACAGTGTTGCACCCTGGTATACCAACACATCAGTTCATACACAGTTGCTTACAAATAAGGAAATTGTTAACGAGATAATATCTCGAACGCCAATAAAGCGAATTGCAGAAGCACATGAAGTATCATCCTTGCAGCTTCTTACATCACTGGACAAGTTATTTGTGTTGATGGAGGATTTACTGTGTATGGATTTCAACCCAGCGTGA 924 0.4275 MANPEGSSRASRWSLKGTTALVTGGTRGIGHAVVEELAEFGATVYTCSRNEEELNARLKEWKEKGFLVSGSVCDVTSPAQRENLVKQVDSAFNGKLNILELVDEDQMVHISEKYLKIGFGQTKFELFHHPPILINQISEYRKSLAIVNNVGTTVRKPTIEYTTEDYSKLMAINLDSAYHLSQLAYPLLKASGNGSIVFISSVAGQTSVASGAIYAANKAAIDQLSRYLACEWAKDNIRSNSVAPWYTNTSVHTQLLTNKEIVNEIISRTPIKRIAEAHEVSSLQLLTSLDKLFVLMEDLLCMDFNPA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01812 307 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Vimu6g01812 307 PRINTS Glucose/ribitol dehydrogenase family signature 214 233 IPR002347 -
Vimu6g01812 307 PRINTS Glucose/ribitol dehydrogenase family signature 235 252 IPR002347 -
Vimu6g01812 307 PRINTS Glucose/ribitol dehydrogenase family signature 270 290 IPR002347 -
Vimu6g01812 307 PRINTS Glucose/ribitol dehydrogenase family signature 188 204 IPR002347 -
Vimu6g01812 307 Gene3D - 3 291 - -
Vimu6g01812 307 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 145 283 IPR036291 -
Vimu6g01812 307 Pfam short chain dehydrogenase 19 99 IPR002347 -
Vimu6g01812 307 PANTHER TROPINONE REDUCTASE 134 283 IPR045000 GO:0016491
Vimu6g01812 307 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 99 IPR036291 -
Vimu6g01812 307 Pfam Enoyl-(Acyl carrier protein) reductase 145 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01812 Vimu-Chr6 16386947 16389183 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01812 12 303 Miscellaneous Gene Families AT2G29290 47.260 1.62e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01812 K08081 - gmx:100819646 374.015