Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01806 ATGGCTCTTGTTCTGAACGTCTCCTTGTGTTCCACTTCTAAGCCACATCTTTCTCTCTCAAACTCCAATTTCAAACCCACCACTCTTTTTCATCTTCCTCTTCTGGGATTCAACGCAAAGCAAACTCGCCAACCATCTCAGAAACTCGCATTTTCAGTTGGTGAGTCCGTGTCTGGTGCCACCCTCGTGGCTCTCCTCTCTGCTTCTTTCATCTTTGTTGATCCCGCACTTGCATTCAAGGGTGGAGGGCCATACGGGCAAGAAGTGACACGGGGACAAGATCTCACTGGGAAGGACTTCAGTGGCAAGACTCTGATCAAACAAGACTTCAAAACGTCCATACTGAGACAAGCCAATTTTAAAGGTGCAAAGTTAATAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGATCTTTCCGATGCTGATCTTCGAAATGCTGATTTTTCCCTGGCTAATGTGACGAAGGCAAATTTAAGCAATGCTAACTTGGAAGGTGCACTTGCAACAGGAAATACTTCTTTTAAGGGATCAATTATTACAGGTGCTGACTTCACGGATGTACCACTAAGAGAAGATCAACGTGAATACCTCTGCAAAGTTGCTGATGGAGTGAACCCAACTACTGGAAATGCTACGCGTGATACATTGTTCTGCAATTAG 666 0.4474 MALVLNVSLCSTSKPHLSLSNSNFKPTTLFHLPLLGFNAKQTRQPSQKLAFSVGESVSGATLVALLSASFIFVDPALAFKGGGPYGQEVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLIGASFFDADLTGADLSDADLRNADFSLANVTKANLSNANLEGALATGNTSFKGSIITGADFTDVPLREDQREYLCKVADGVNPTTGNATRDTLFCN 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01806 221 Pfam Pentapeptide repeats (8 copies) 133 168 IPR001646 -
Vimu6g01806 221 FunFam thylakoid lumenal 15 kDa protein 1, chloroplastic 78 221 - -
Vimu6g01806 221 SUPERFAMILY Pentapeptide repeat-like 87 191 - -
Vimu6g01806 221 PANTHER THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTIC 1 221 IPR044213 -
Vimu6g01806 221 Gene3D - 78 221 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01806 - - pvu:PHAVU_001G235600g 403.675