Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01800 ATGACTACGCAGAGTATGTTGGATATTGCTTTAAATGATATACTTCGGGTGGTCACACCATTACAAGAAGATTGGAAGATACGATTTGCAATTATTAATGACATAAGAAGCATTGTTGAATCTGTGGAAAGCTTGAGAGTTCTATCACTATTAGAGTTACATGGTTGTTCTAAAGTGGTTTTTTCCTCCTCATTCAAAGAGGGGAAAAGAGCAACTGTTGAGCCATTTGGGTCATTTGTATCTAATCTCTTCACCCGATGGGGTGACTTGGATATTTCAATTGAGCTATCAAATGGTTTGCATATTTCATCTGCTGGGAAAAAACAAAAACAAACTTTATTGGGGGAAGTTTTAAAAGCTTTGAGAATGAAAGGTGGAGGGAGCAACTTGCAGTTCATCCCCAATGCACGAGTTCCCATTTTAAAATTTAAAAGCAACCGTCAGGGTGTATCTTGTGATATTTCAATTAATAACCTGCCAGGCCAAATGAAATCCAAGATTTTGCTTTGGATGAACAAGATAGATGGCCGCTTTCATGATATGGTTTTACTGGTCAAGGAATGGGCCAAAGCTCACAAAATCAATAACTCTAAAGCTGGAACTTTCAACTCCTATTCCCTAAGTTTACTTGTCATATTTCATTTTCAGGTAACTACAAGATGGAGATTTGGTGGATCAGTGTGGCAAATTGGGGATTTGAGAATGGTGGGTCGAGGAGGGGAAGGGGGGACCCTCTTTGGTTATCCTTTCCTTTTGCTCTCCCTCATGGCAGTGCTACTTTGTCTATACAGCTTGAGGTATACGTTAGGGGTGCTTAAAGTAACCGGGGTTAGAACTGATGCTGAGAACCGTATCACAGAAACATGTAATGCTAGTATAAACCAGCACATATCAAACAAGGGAAGGTCAATTAATAAAAAGTCCGTGCGTGATCTTTTTGTTGAATTCTTAGGAAAGTATGCTCAGATGGATTCATGGGCGTCAAATTTGGGAATTTGCCCCTACACTGGACAATGGGAGCAGATAGAGAACAACACGATTTGGTTACCCAAGACTTACGCTATATTTGTAATTCTCCGCATATGTTCATTTCTACTTTTTGGAGACATTATGGTTGAGGATCCCTTTGAGCAGCCGCAAAATACTGCAAGATCTGTCAGTGCAGGACAACTGAAGAAGATAAGCGAGGCCTTTTCAAAATCATACTCCTTTCTTTCCTCGAACAATCATAATCTAAATTCACTTTTGACAATGTTAGCACCACCACATGTAGTAAAATCTATCACAGGTATTCAAAATTACAACGGAAGTTACTTTCACCCAACTCAGCCAAAAGTACAGAGAGTTATGCGCACTCCACTGCAGTTACAACATTTTCAATATGCCAGTCCAGGAACAAGCTCCAACAGTTCAGCTTCAAATGGACATATGCAGATGCCCAGAGGAACAAACTTTAGCATTCCATCTTCAAATGGACATATGCAGATGCCTAGAGGAACAAACTTTAGCATTCCATCTTCAAATGGGTATATTCAGATGCCTAGAGGAACAAGCTTCAACATCCCATCTTCTTATGGGCATATGCAAATGCCTAGAGTAACAAGCTTCAACATTCCACCTTCAAATGGGCATATACAGATGCCTAGAGGAACAAGTATCAGCAGTTCATCTTCAAATGGGCATATACAGAACCCTAGAGAAACTAAGAAGCCTAGAGGAACCAACTTCACCAGTGCATCTTCAAATGGGCATGTACCGGTGAATAAAGGCCAGCAGATGTGGAGGCCAAAGAGTTAA 1797 0.4035 MTTQSMLDIALNDILRVVTPLQEDWKIRFAIINDIRSIVESVESLRVLSLLELHGCSKVVFSSSFKEGKRATVEPFGSFVSNLFTRWGDLDISIELSNGLHISSAGKKQKQTLLGEVLKALRMKGGGSNLQFIPNARVPILKFKSNRQGVSCDISINNLPGQMKSKILLWMNKIDGRFHDMVLLVKEWAKAHKINNSKAGTFNSYSLSLLVIFHFQVTTRWRFGGSVWQIGDLRMVGRGGEGGTLFGYPFLLLSLMAVLLCLYSLRYTLGVLKVTGVRTDAENRITETCNASINQHISNKGRSINKKSVRDLFVEFLGKYAQMDSWASNLGICPYTGQWEQIENNTIWLPKTYAIFVILRICSFLLFGDIMVEDPFEQPQNTARSVSAGQLKKISEAFSKSYSFLSSNNHNLNSLLTMLAPPHVVKSITGIQNYNGSYFHPTQPKVQRVMRTPLQLQHFQYASPGTSSNSSASNGHMQMPRGTNFSIPSSNGHMQMPRGTNFSIPSSNGYIQMPRGTSFNIPSSYGHMQMPRVTSFNIPPSNGHIQMPRGTSISSSSSNGHIQNPRETKKPRGTNFTSASSNGHVPVNKGQQMWRPKS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01800 598 PANTHER POLY A POLYMERASE CID PAP -RELATED 5 557 - -
Vimu6g01800 598 SUPERFAMILY PAP/OAS1 substrate-binding domain 174 416 - -
Vimu6g01800 598 Gene3D - 167 223 - -
Vimu6g01800 598 Gene3D - 239 419 - -
Vimu6g01800 598 CDD NT_PAP_TUTase 71 170 - -
Vimu6g01800 598 MobiDBLite consensus disorder prediction 531 588 - -
Vimu6g01800 598 Gene3D Beta Polymerase, domain 2 51 166 IPR043519 -
Vimu6g01800 598 MobiDBLite consensus disorder prediction 462 515 - -
Vimu6g01800 598 SUPERFAMILY Nucleotidyltransferase 7 170 IPR043519 -
Vimu6g01800 598 MobiDBLite consensus disorder prediction 531 598 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01800 - - vum:124831893 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01800 6 16283981 16295751 Vimu6g01800 6 16283981 16295751 ECH