Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01773 ATGAAGAAGCTTTGTCCCAATCTTGATCGCGAGGATGGGCTCGAAACCGTTCTTGAGGTCCCTATTCCGGAGGAGATTCTCACCCACAAGAGTGGAACCACCAGAGCTTGGGACAACATGAAGAACTGGATGAAGCCCCACGTTGAGTCCAGATCCAACTCGACGTCCATGGCGGCAGTTTTTGGAGGGAAAAACACAGAGATTCAGCTTTTGTTGGGTGTTGTTGGAGCGCCATTAATCCCTTCACCCATCGCCTCTGACAACCAACCCATCACTCGCAGCATTAAAGACCAACACATTGAGGTTTCGATGGCTAAATACATAGTGAAGCAGTATGTGGCGGCGGTGGGAGGAGAACGTGCTTTGAATTGTGTGGACAGCATGTATGCGATGGGGCAGGTGAAGATGGCAACAACAGAGTTTTCTACTGGAGAAGGAGGTAGTGTGAACAGTAAGAAGGTGATGAAAGTGAAGAATTTGCAGATGAAGGGAGAGATGGGGGGATTCGTGGTTTGGCAGAAGAGGCCAGAGTTATGGTGCTTAGAGCTTGTGGTTTCTGGGTACAAGATCAGTGCAGGGAGTGATGGTAAAGTGGCATGGAGGCAAACCCCTTGGCACCATTCTCATGCTTCTCGAGGCCCACCAAGACCTCTTAGACGTTTCTTACAGGGTCTTGATCCAAGGTCGACGGCTAATTTGTTCGGCAACTCTATCTGCATTGGAGAGAAGACAGTGAACAACGAAGATTGTTTCATATTGAAAGTGGAAACCGAGACGTCGACACTGAGAGCAAGGAGCAACAGCAACGTAGAGATAGTTCGGCACACGGTGTGGGGGTATTTCAGCCAAAGAACAGGTTTATTAGTTCAACTAGAAGACTCTCACTTACTAAAACTAAAGTCTCATGAACACGAGAGCATATACTGGGAAACGAACATGGAGTCTCTGTTACAAGACTACAGAAGCGTGGATGGCATTCAAATAGCACACGGTGGCAAGACTTGGGTGTCCTTGTTGAGGTTTGGTGGGGGCCCCGAGACACATTCCAGGACACTAATGGAAGAGGTATGGCAAGTTGAGGAAGTGGACTTTAACATCAAAGGGTTGTCCATAGACTGCTTTTTGCCTCCTAGTGATTTGAAGAGAGAGGAAGATAATGAAGAGGAAGCAGAGTGTGGTGGCCGGGTGGTTGCAAGCAATAATGCCAAGTTACCCTACAAGATTCGTTCGGCTTCTTTTAGGATCAGTGCTTCAAAAGTAGCAGCTGTCAACTTGGATGATTCCTGTACCAGCGAGAGCGATGAAGATTTGTAA 1314 0.4779 MKKLCPNLDREDGLETVLEVPIPEEILTHKSGTTRAWDNMKNWMKPHVESRSNSTSMAAVFGGKNTEIQLLLGVVGAPLIPSPIASDNQPITRSIKDQHIEVSMAKYIVKQYVAAVGGERALNCVDSMYAMGQVKMATTEFSTGEGGSVNSKKVMKVKNLQMKGEMGGFVVWQKRPELWCLELVVSGYKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFGNSICIGEKTVNNEDCFILKVETETSTLRARSNSNVEIVRHTVWGYFSQRTGLLVQLEDSHLLKLKSHEHESIYWETNMESLLQDYRSVDGIQIAHGGKTWVSLLRFGGGPETHSRTLMEEVWQVEEVDFNIKGLSIDCFLPPSDLKREEDNEEEAECGGRVVASNNAKLPYKIRSASFRISASKVAAVNLDDSCTSESDEDL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01773 437 Pfam Protein of unknown function (DUF620) 128 377 IPR006873 -
Vimu6g01773 437 PANTHER LIPASE 1 383 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01773 Vimu-Chr6 16081590 16084219 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01773 - - gmx:100782214 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01773 6 16081590 16084219 Vimu6g01773 6 16081590 16084219 ECH
Vimu6g01773 6 16081590 16084219 Vimu1g00958 1 6767379 6769559 PCT